RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FCARP24071 287 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 LHX1P48742 406 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 GPC5P78333 572 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 NUCB2P80303 420 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 MYL7Q01449 175 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 PFKPQ01813 784 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 NFE2Q16621 373 aaPredicted RBP15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 FAM78AQ5JUQ0 283 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 SCARA3Q6AZY7 606 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 LRRTM3Q86VH5 581 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 SLC9A9Q8IVB4 645 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 FSIP1Q8NA03 581 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 RDH13Q8NBN7 331 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 ST13P5Q8NFI4 369 aaPredicted RBP15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 SHKBP1Q8TBC3 707 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 NUP210Q8TEM1 1887 aaPredicted RBP15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 SMARCD2Q92925 531 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 HPDLQ96IR7 371 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 FNBP1Q96RU3 617 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 TRPV4Q9HBA0 871 aa15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 DDX43Q9NXZ2 648 aaKnown RBP15.98■□□□□ 0.15
SMIM11A-203ENST00000399299 PDXKO00764 312 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 NRG2O14511 850 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 GABRDO14764 452 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 EXOC3O60645 756 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 RHOBTB3O94955 611 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 RPN1P04843 607 aaKnown RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 DLATP10515 647 aaKnown RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 HAPLN1P10915 354 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 ATF6P18850 670 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 TNNI1P19237 187 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 VEPH1Q14D04 833 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 MGAT5BQ3V5L5 792 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 TANGO2Q6ICL3 276 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 KRBA2Q6ZNG9 492 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 DNAJB7Q7Z6W7 309 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 CCDC47Q96A33 483 aaKnown RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 SHDQ96IW2 340 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 SEPT5Q99719 369 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 KCTD10Q9H3F6 313 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 TBC1D17Q9HA65 648 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 ZFP14Q9HCL3 533 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 ABCB6Q9NP58 842 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 DMAC2Q9NW81 257 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 PCDHB5Q9Y5E4 795 aa15.97■□□□□ 0.15
SMIM11A-203ENST00000399299 DENND4CQ5VZ89 1909 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 A0A1W2PRU2 124 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 SOAT2O75908 522 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 PCSK1P29120 753 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 STARD6P59095 220 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 PRKCQQ04759 706 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 DPYDQ12882 1025 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 TEAD2Q15562 447 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 SOWAHAQ2M3V2 549 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 INTS6LQ5JSJ4 861 aaKnown RBP15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 E2F7Q96AV8 911 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 CCDC127Q96BQ5 260 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 ZSWIM3Q96MP5 696 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 PKMYT1Q99640 499 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 PLA2G2FQ9BZM2 168 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 GOLPH3LQ9H4A5 285 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 ABI2Q9NYB9 513 aaPredicted RBP15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 COL4A2P08572 1712 aa15.96■□□□□ 0.15
SMIM11A-203ENST00000399299 MIA3Q5JRA6 1907 aa15.96■□□□□ 0.14
SMIM11A-203ENST00000399299 PI15O43692 258 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 ZNF202O95125 648 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 KIF20AO95235 890 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 STAU1O95793 577 aaKnown RBP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 GJA1P17302 382 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 RFX1P22670 979 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 AP3M2P53677 418 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 CLDN10P78369 228 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 KCNB1Q14721 858 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 MLF2Q15773 248 aaPredicted RBP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 GAREM2Q75VX8 874 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 OSTM1Q86WC4 334 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 CCDC105Q8IYK2 499 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 ZSCAN18Q8TBC5 510 aaPredicted RBP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 FAM200AQ8TCP9 573 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 DEPDC1BQ8WUY9 529 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 KBTBD7Q8WVZ9 684 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 DNASE1L2Q92874 299 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 CCDC34Q96HJ3 373 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 FUBP3Q96I24 572 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 LPIN3Q9BQK8 851 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 DDX23Q9BUQ8 820 aaKnown RBP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 SLITRK6Q9H5Y7 841 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 GDPD2Q9HCC8 539 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 ZNF334Q9HCZ1 680 aaPredicted RBP15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 TMLHEQ9NVH6 421 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 OBSL1O75147 1896 aa15.95■□□□□ 0.14
SMIM11A-203ENST00000399299 PTPRDP23468 1912 aa15.94■□□□□ 0.14
SMIM11A-203ENST00000399299 CST3P01034 146 aaPredicted RBP15.94■□□□□ 0.14
SMIM11A-203ENST00000399299 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
SMIM11A-203ENST00000399299 WARSP23381 471 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms