RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 HMGCRP04035 888 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 HOXC6P09630 235 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 FGFR1P11362 822 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 NEFHP12036 1026 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 HOXD10P28358 340 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 ADORA2BP29275 332 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 SLC26A2P50443 739 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 MFAP3P55082 362 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 KRT83P78385 493 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 USP4Q13107 963 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 CCDC70Q6NSX1 233 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 ACOT1Q86TX2 421 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 CCDC33Q8N5R6 958 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 TSEN2Q8NCE0 465 aaKnown RBP13.93□□□□□ -0.18
TOP3B-202ENST00000398793 AENQ8WTP8 325 aaKnown RBP13.93□□□□□ -0.18
TOP3B-202ENST00000398793 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 FZD8Q9H461 694 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 CHCHD3Q9NX63 227 aaKnown RBP13.93□□□□□ -0.18
TOP3B-202ENST00000398793 IGKV6-21A0A0C4DH24 114 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 SMNDC1O75940 238 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■■□ 24.8
TOP3B-202ENST00000398793 RTN3O95197 1032 aaPredicted RBP13.93□□□□□ -0.18
TOP3B-202ENST00000398793 ATP6V1G2O95670 118 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 GARTP22102 1010 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 SLC7A5Q01650 507 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 ALCAMQ13740 583 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 ZNF467Q7Z7K2 595 aaPredicted RBP13.93□□□□□ -0.18
TOP3B-202ENST00000398793 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 GPR88Q9GZN0 384 aa13.93□□□□□ -0.18
TOP3B-202ENST00000398793 B4GALT4O60513 344 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 GPR32O75388 356 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
TOP3B-202ENST00000398793 GNA15P30679 374 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 PDE6CP51160 858 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 ANKRD20A8PQ5CZ79 823 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 HIBCHQ6NVY1 386 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-202ENST00000398793 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-202ENST00000398793 TRIM58Q8NG06 486 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 LRRN4Q8WUT4 740 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 EZH1Q92800 747 aaPredicted RBP13.92□□□□□ -0.18
TOP3B-202ENST00000398793 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 MKNK1Q9BUB5 465 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 MIS12Q9H081 205 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 LMCD1Q9NZU5 365 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 PADI3Q9ULW8 664 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 L3MBTL1Q9Y468 752 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 CNTNAP2Q9UHC6 1331 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 ANP32DO95626 131 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 C4BPAP04003 597 aaKnown RBP13.92□□□□□ -0.18
TOP3B-202ENST00000398793 SCTRP47872 440 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 CDO1Q16878 200 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 ZACNQ401N2 412 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 VPS36Q86VN1 386 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 TET1Q8NFU7 2136 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 B4GALNT2Q8NHY0 566 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 MFSD14AQ96MC6 490 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 TRIM31Q9BZY9 425 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 CCDC113Q9H0I3 377 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 DPP3Q9NY33 737 aa13.92□□□□□ -0.18
TOP3B-202ENST00000398793 KCNK3O14649 394 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 MGEA5O60502 916 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 FAM107AO95990 144 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CYP11B1P15538 503 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 SOX4Q06945 474 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CKAP4Q07065 602 aaKnown RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 C1orf131Q8NDD1 294 aaKnown RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CTNNBL1Q8WYA6 563 aaPredicted RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 TIPINQ9BVW5 301 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CELF4Q9BZC1 486 aaKnown RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
TOP3B-202ENST00000398793 C15orf41Q9Y2V0 281 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 MAP3K6O95382 1288 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 NR1D1P20393 614 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CYP2C18P33260 490 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 VAV2P52735 878 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 PPP1R7Q15435 360 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 SLC18A3Q16572 532 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 ZNF667Q5HYK9 610 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 C1QTNF12Q5T7M4 302 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 C6orf89Q6UWU4 347 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 USP37Q86T82 979 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 BRSK2Q8IWQ3 736 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 KLHL7Q8IXQ5 586 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 EMC1Q8N766 993 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 CCDC51Q96ER9 411 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 ADAMTS10Q9H324 1103 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
TOP3B-202ENST00000398793 H0YCG3 227 aa13.9□□□□□ -0.18
TOP3B-202ENST00000398793 PYGBP11216 843 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms