RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 KLRC2P26717 231 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 WDR72Q3MJ13 1102 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 ZNF484Q5JVG2 852 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 DRICH1Q6PGQ1 229 aaPredicted RBP14.63□□□□□ -0.07
PRAME-202ENST00000398743 SPOCD1Q6ZMY3 1216 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 OTUD6BQ8N6M0 293 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 SHCBP1Q8NEM2 672 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 CHMP6Q96FZ7 201 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 LHX5Q9H2C1 402 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 IFT122Q9HBG6 1241 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 DNAJC17Q9NVM6 304 aaKnown RBP14.63□□□□□ -0.07
PRAME-202ENST00000398743 DDX20Q9UHI6 824 aaKnown RBP14.63□□□□□ -0.07
PRAME-202ENST00000398743 NFICP08651 508 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 ATP5DP30049 168 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 PTPN7P35236 360 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 RAP1GAPP47736 663 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 POU5F1BQ06416 359 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 KYNUQ16719 465 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 QPCTQ16769 361 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 DENND1BQ6P3S1 775 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 CPLX4Q7Z7G2 160 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 C1orf127Q8N9H9 656 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 ATXN2LQ8WWM7 1075 aaKnown RBP14.63□□□□□ -0.07
PRAME-202ENST00000398743 FAXDC2Q96IV6 333 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 BCO2Q9BYV7 579 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 INTS9Q9NV88 658 aaKnown RBP14.63□□□□□ -0.07
PRAME-202ENST00000398743 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 SBF1O95248 1867 aa14.63□□□□□ -0.07
PRAME-202ENST00000398743 GPR25O00155 361 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 INSRRP14616 1297 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 LIG3P49916 1009 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 ARHGAP1Q07960 439 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 LAMC2Q13753 1193 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 FAM187BQ17R55 369 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 P3H1Q32P28 736 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 PTPN20Q4JDL3 420 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 EAPPQ56P03 285 aaPredicted RBP14.62□□□□□ -0.07
PRAME-202ENST00000398743 TFDP3Q5H9I0 405 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 CEP128Q6ZU80 1094 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 MICALL1Q8N3F8 863 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 IPO4Q8TEX9 1081 aaKnown RBP14.62□□□□□ -0.07
PRAME-202ENST00000398743 EFCC1Q9HA90 598 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 NINJ2Q9NZG7 142 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 DNPEPQ9ULA0 475 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 ZNF148Q9UQR1 794 aa14.62□□□□□ -0.07
PRAME-202ENST00000398743 hCG_1818297A0A087WSY0 165 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 ITGB3P05106 788 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 LGALS2P05162 132 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 STAG3L1P0CL83 205 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 MCF2P10911 925 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 KRT3P12035 628 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 IFT88Q13099 833 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 GKAP1Q5VSY0 366 aaPredicted RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 TXNRD3NBQ6F5E7 133 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 HIBCHQ6NVY1 386 aaPredicted RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 C6orf89Q6UWU4 347 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 POLNQ7Z5Q5 900 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 EXOC3L1Q86VI1 746 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 RELL1Q8IUW5 271 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 FOXP3Q9BZS1 431 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 A0A087WZ62 844 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 LRRD1A4D1F6 860 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 SIGLEC16A6NMB1 481 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 LACTBL1A8MY62 500 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 GOLGA8SH3BPF8 625 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 MAGEB2O15479 319 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 CPP00450 1065 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 PSMA2P25787 234 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 RAD23BP54727 409 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 CDH8P55286 799 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 CCDC38Q502W7 563 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 JADE1Q6IE81 842 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 USP50Q70EL3 339 aaPredicted RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 CACNA2D3Q8IZS8 1091 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 ZCCHC9Q8N567 271 aaKnown RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 ALLCQ8N6M5 410 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 ZC3H15Q8WU90 426 aaKnown RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 SEC16BQ96JE7 1060 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 PWWP2AQ96N64 755 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 FDXACB1Q9BRP7 624 aaPredicted RBP14.61□□□□□ -0.07
PRAME-202ENST00000398743 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 AKT3Q9Y243 479 aa14.61□□□□□ -0.07
PRAME-202ENST00000398743 TCEA3O75764 348 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 CYP2C8P10632 490 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 DRD4P21917 467 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 ATICP31939 592 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 RFC1P35251 1148 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 CDKN2BP42772 138 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 PSMC1P62191 440 aaKnown RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 SLC20A2Q08357 652 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 SNAPC2Q13487 334 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 AMHR2Q16671 573 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 RNF187Q5TA31 235 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 PRUNE1Q86TP1 453 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
PRAME-202ENST00000398743 FNIP1Q8TF40 1166 aa14.6□□□□□ -0.07
PRAME-202ENST00000398743 ARHGEF2Q92974 986 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms