RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 DZANK1Q9NVP4 752 aa16.89■□□□□ 0.29
MBD1-207ENST00000398488 HMGXB4Q9UGU5 601 aa16.89■□□□□ 0.29
MBD1-207ENST00000398488 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
MBD1-207ENST00000398488 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
MBD1-207ENST00000398488 NFE2L3Q9Y4A8 694 aa16.89■□□□□ 0.29
MBD1-207ENST00000398488 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
MBD1-207ENST00000398488 VCANP13611 3396 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 DOCK6Q96HP0 2047 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 ARHGEF37A1IGU5 675 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 STX10O60499 249 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 TACC1O75410 805 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 PAPLNO95428 1278 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
MBD1-207ENST00000398488 DUSP4Q13115 394 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 ORC1Q13415 861 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 SMAD4Q13485 552 aaKnown RBP16.88■□□□□ 0.29
MBD1-207ENST00000398488 ANO6Q4KMQ2 910 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 HDAC7Q8WUI4 952 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 TAF4BQ92750 862 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 ARID3AQ99856 593 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 RHOBTB2Q9BYZ6 727 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 SFXN1Q9H9B4 322 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 FANCLQ9NW38 375 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 GTF3C4Q9UKN8 822 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■□□□ 12
MBD1-207ENST00000398488 C2orf16Q68DN1 1984 aa16.88■□□□□ 0.29
MBD1-207ENST00000398488 A0A0C4DFX4 3053 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 NRG2O14511 850 aaPredicted RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 CCL16O15467 120 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 CLSTN1O94985 981 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 FGFR1OPO95684 399 aaKnown RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 SRGAP2BP0DMP2 458 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 CCDC192P0DO97 292 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 GNL1P36915 607 aaPredicted RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 MYL7Q01449 175 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 LRMPQ12912 555 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 TPD52L1Q16890 204 aaPredicted RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 TPGS2Q68CL5 300 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 GPR149Q86SP6 731 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 TCEAL8Q8IYN2 117 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 OR6B3Q8NGW1 331 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 NECAB3Q96P71 396 aaPredicted RBP16.87■□□□□ 0.29
MBD1-207ENST00000398488 TWNKQ96RR1 684 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 BCO2Q9BYV7 579 aa16.87■□□□□ 0.29
MBD1-207ENST00000398488 AFPP02771 609 aaKnown RBP16.86■□□□□ 0.29
MBD1-207ENST00000398488 PTMSP20962 102 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 LHX1P48742 406 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 NTHL1P78549 312 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 APBA1Q02410 837 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 ZSCAN23Q3MJ62 389 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 MIIPQ5JXC2 388 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 CDKAL1Q5VV42 579 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 FAM171BQ6P995 826 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 CMASQ8NFW8 434 aaPredicted RBP16.86■□□□□ 0.29
MBD1-207ENST00000398488 WHAMMQ8TF30 809 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 KAT5Q92993 513 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 SYT15Q9BQS2 421 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 OXCT2Q9BYC2 517 aaPredicted RBP16.86■□□□□ 0.29
MBD1-207ENST00000398488 PRKD2Q9BZL6 878 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 POMKQ9H5K3 350 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 HCFC1R1Q9NWW0 138 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 INSL5Q9Y5Q6 135 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 SPDYE4A6NLX3 237 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 KCNJ18B7U540 433 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 PRRG1O14668 218 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 PMM2O15305 246 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 MTIF2P46199 727 aaKnown RBP16.86■□□□□ 0.29
MBD1-207ENST00000398488 GPR15P49685 360 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 KCNJ12Q14500 433 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 SMAD2Q15796 467 aaKnown RBP16.86■□□□□ 0.29
MBD1-207ENST00000398488 PPM1LQ5SGD2 360 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 LIN9Q5TKA1 542 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 NIF3L1Q9GZT8 377 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 SNX25Q9H3E2 840 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 ZDHHC7Q9NXF8 308 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 CEP72Q9P209 647 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 YIPF1Q9Y548 306 aa16.86■□□□□ 0.29
MBD1-207ENST00000398488 A8MXQ7 604 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 FAM163BP0C2L3 166 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 NDST1P52848 882 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 ITIH3Q06033 890 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 TWF1Q12792 350 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 TCP11X2Q5H9J9 407 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 ARHGEF19Q8IW93 802 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 DHX40Q8IX18 779 aaKnown RBP16.85■□□□□ 0.29
MBD1-207ENST00000398488 AOPEPQ8N6M6 819 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 EHBP1Q8NDI1 1231 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 STKLD1Q8NE28 680 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 SMG7Q92540 1137 aaKnown RBP16.85■□□□□ 0.29
MBD1-207ENST00000398488 CRACR2AQ9BSW2 395 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 ABI2Q9NYB9 513 aaPredicted RBP16.85■□□□□ 0.29
MBD1-207ENST00000398488 CDH9Q9ULB4 789 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 NOTCH4Q99466 2003 aa16.85■□□□□ 0.29
MBD1-207ENST00000398488 PTPN1P18031 435 aaKnown RBP16.84■□□□□ 0.29
MBD1-207ENST00000398488 CD58P19256 250 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms