RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 FRMD5Q7Z6J6 570 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 RNF135Q8IUD6 432 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 NXPE3Q969Y0 559 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 ZNF512Q96ME7 567 aaPredicted RBP15.3■□□□□ 0.04
HDDC2-202ENST00000398153 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 ABCB6Q9NP58 842 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 EPS15L1Q9UBC2 864 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 CDH22Q9UJ99 828 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 CDH9Q9ULB4 789 aa15.3■□□□□ 0.04
HDDC2-202ENST00000398153 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 BIN1O00499 593 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 OR4Q2P0C623 313 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 FSHRP23945 695 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 PMS1P54277 932 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 EPHB3P54753 998 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 DUSP4Q13115 394 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 PAK1Q13153 545 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 PABPC1LQ4VXU2 614 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 INTS6LQ5JSJ4 861 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 SCARA3Q6AZY7 606 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 GRASPQ7Z6J2 395 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 KBTBD7Q8WVZ9 684 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 NUP62CLQ9H1M0 184 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 FAM124BQ9H5Z6 455 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 DNMT3BQ9UBC3 853 aaKnown RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
HDDC2-202ENST00000398153 POLIQ9UNA4 740 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 PCDHB5Q9Y5E4 795 aa15.29■□□□□ 0.04
HDDC2-202ENST00000398153 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 DCXO43602 365 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 VNN1O95497 513 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 VNN2O95498 520 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 FGF19O95750 216 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 EPHA5P54756 1037 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 TWF1Q12792 350 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 CYP4A22Q5TCH4 519 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 FAM171BQ6P995 826 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 C4orf50Q6ZRC1 276 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 ITIH5Q86UX2 942 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 LRRTM3Q86VH5 581 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 CEP295NLQ96MC4 621 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 PGLYRP2Q96PD5 576 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 TMEM209Q96SK2 561 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 PKMYT1Q99640 499 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 SNX25Q9H3E2 840 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 IGSF9Q9P2J2 1179 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 RWDD2AQ9UIY3 292 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
HDDC2-202ENST00000398153 PMM2O15305 246 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 MBD3O95983 291 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 RHOP08100 348 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 TRIM49CP0CI26 452 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 LAMP2P13473 410 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 TRIM21P19474 475 aaKnown RBP15.27■□□□□ 0.04
HDDC2-202ENST00000398153 GBP2P32456 591 aaPredicted RBP15.27■□□□□ 0.04
HDDC2-202ENST00000398153 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 GCLMP48507 274 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.04
HDDC2-202ENST00000398153 PPP3CAQ08209 521 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 VEPH1Q14D04 833 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 TTC39CQ8N584 583 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 PSMG2Q969U7 264 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
HDDC2-202ENST00000398153 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 DNAI2Q9GZS0 605 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 GDE1Q9NZC3 331 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 NXF1Q9UBU9 619 aaKnown RBP15.27■□□□□ 0.04
HDDC2-202ENST00000398153 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 CDH7Q9ULB5 785 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 COQ4Q9Y3A0 265 aa15.27■□□□□ 0.04
HDDC2-202ENST00000398153 HAPLN1P10915 354 aaPredicted RBP15.26■□□□□ 0.03
HDDC2-202ENST00000398153 MAGEA11P43364 429 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 MXI1P50539 228 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 RPL10AP62906 217 aaKnown RBP15.26■□□□□ 0.03
HDDC2-202ENST00000398153 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 MGAT5BQ3V5L5 792 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 PDZD4Q76G19 769 aaPredicted RBP15.26■□□□□ 0.03
HDDC2-202ENST00000398153 UNC93AQ86WB7 457 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 OSTM1Q86WC4 334 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 UBALD2Q8IYN6 164 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 FEZF2Q8TBJ5 459 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 MYCBPAPQ8TBZ2 947 aa15.26■□□□□ 0.03
HDDC2-202ENST00000398153 EEF2KMTQ96G04 330 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms