RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 FOXR2Q6PJQ5 311 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 SETD3Q86TU7 594 aaPredicted RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 PRELID2Q8N945 189 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 MAGEC3Q8TD91 643 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 PPP1R36Q96LQ0 422 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 TMEM121Q9BTD3 319 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 MRPL1Q9BYD6 325 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 IGSF9BQ9UPX0 1349 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 GOLGA8CPA6NN73 597 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 A8MXQ7 604 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 EXTL3O43909 919 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 AQP5P55064 265 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 LRRC74BQ6ZQY2 392 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 GADL1Q6ZQY3 521 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 FRMD8P1Q9BZ68 369 aaPredicted RBP11.56□□□□□ -0.56
HPS4-202ENST00000398145 UBXN6Q9BZV1 441 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 TBC1D23Q9NUY8 699 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 TAGLN3Q9UI15 199 aa11.56□□□□□ -0.56
HPS4-202ENST00000398145 POLD1P28340 1107 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 RIPK1Q13546 671 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 CUL2Q13617 745 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 FLOT2Q14254 428 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 Q4G0T1 1027 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 IRF2BP2Q7Z5L9 587 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 BBS5Q8N3I7 341 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 TTC8Q8TAM2 541 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 CLMNQ96JQ2 1002 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 C17orf75Q9HAS0 396 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ECE2O60344 883 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 SUPT3HO75486 399 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 FDX1P10109 184 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 PMLP29590 882 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 LACTB2Q53H82 288 aaPredicted RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 SLC45A4Q5BKX6 768 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 EXOC3L1Q86VI1 746 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 TCP10LQ8TDR4 215 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ZNF75CPQ92670 426 aaPredicted RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 TMEM143Q96AN5 459 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 TBC1D10AQ9BXI6 508 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 RTFDC1Q9BY42 306 aaPredicted RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 UNC45AQ9H3U1 944 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 CTNNAL1Q9UBT7 734 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 AURKCQ9UQB9 309 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 FCHO1O14526 889 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ATP9BO43861 1147 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 LCA5LO95447 670 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 BGNP21810 368 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 PCYT1AP49585 367 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 ITPRIPL1Q6GPH6 555 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 INTS5Q6P9B9 1019 aaKnown RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 SV2AQ7L0J3 742 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 SLC26A11Q86WA9 606 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 MFN1Q8IWA4 741 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 PPP2R3CQ969Q6 453 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
HPS4-202ENST00000398145 KIFC3Q9BVG8 833 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 TTYH3Q9C0H2 523 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 NIF3L1Q9GZT8 377 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 PCDH9Q9HC56 1237 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 CHST7Q9NS84 486 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
HPS4-202ENST00000398145 SYCE1LA8MT33 242 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 S100BP04271 92 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 PECAM1P16284 738 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 SPRP35270 261 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 RFC5P40937 340 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 PHKA2P46019 1235 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 ATXN3P54252 364 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 YWHAHQ04917 246 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 CLEC16AQ2KHT3 1053 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 HGSNATQ68CP4 663 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 C4orf32Q8N8J7 132 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 ACTL7BQ9Y614 415 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 SEC24DO94855 1032 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 CLPTM1O96005 669 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 MMP10P09238 476 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 PTK6Q13882 451 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 EFHC1Q5JVL4 640 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 AADACL2Q6P093 401 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 ACTL9Q8TC94 416 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 C20orf96Q9NUD7 363 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 MRGBPQ9NV56 204 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 STX18Q9P2W9 335 aaKnown RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 DNM1LO00429 736 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 E2F6O75461 281 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 FLT3P36888 993 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms