RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SV2CQ496J9 727 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 ELMSAN1Q6PJG2 1045 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 SUSD3Q96L08 255 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 BPIFA3Q9BQP9 254 aa27.3■■□□□ 1.96
U2AF1-203ENST00000398137 CLSTN1O94985 981 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 CST3P01034 146 aaPredicted RBP27.29■■□□□ 1.96
U2AF1-203ENST00000398137 MTIF2P46199 727 aaKnown RBP27.29■■□□□ 1.96
U2AF1-203ENST00000398137 MYL6P60660 151 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 NHLH1Q02575 133 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 NCOA4Q13772 614 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 NCAPHQ15003 741 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 DSTYKQ6XUX3 929 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 SUGP1Q8IWZ8 645 aaKnown RBP27.29■■□□□ 1.96
U2AF1-203ENST00000398137 RSAD2Q8WXG1 361 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 HPDLQ96IR7 371 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 FANCLQ9NW38 375 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 EPS15L1Q9UBC2 864 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.29■■□□□ 1.96
U2AF1-203ENST00000398137 BACE2Q9Y5Z0 518 aa27.29■■□□□ 1.96
U2AF1-203ENST00000398137 KCNJ18B7U540 433 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 TBC1D4O60343 1298 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 HLA-DRAP01903 254 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 C8AP07357 584 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 MYO1EQ12965 1108 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 KCNJ12Q14500 433 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 CBWD6Q4V339 395 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 CBWD3Q5JTY5 395 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 CBWD5Q5RIA9 395 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 PDXDC1Q6P996 788 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 DHX40Q8IX18 779 aaKnown RBP27.28■■□□□ 1.96
U2AF1-203ENST00000398137 CDY1Q9Y6F8 540 aa27.28■■□□□ 1.96
U2AF1-203ENST00000398137 KPNA7A9QM74 516 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 AVPR2P30518 371 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 NTHL1P78549 312 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 MYL7Q01449 175 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 TDGQ13569 410 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 CDKAL1Q5VV42 579 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 KRT39Q6A163 491 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 TAS1R2Q8TE23 839 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 ELMO3Q96BJ8 720 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 SENP8Q96LD8 212 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 PIDD1Q9HB75 910 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 PCDHB8Q9UN66 801 aa27.27■■□□□ 1.96
U2AF1-203ENST00000398137 M0QZQ0 153 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 PAX3P23760 479 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 GBP2P32456 591 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-203ENST00000398137 FMO5P49326 533 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 TCF15Q12870 199 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 MRPL58Q14197 206 aaKnown RBP27.26■■□□□ 1.95
U2AF1-203ENST00000398137 GRASPQ7Z6J2 395 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-203ENST00000398137 XYLT2Q9H1B5 865 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 CBX8Q9HC52 389 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.26■■□□□ 1.95
U2AF1-203ENST00000398137 DUSP12Q9UNI6 340 aa27.26■■□□□ 1.95
U2AF1-203ENST00000398137 TIMM13Q9Y5L4 95 aaPredicted RBP27.26■■□□□ 1.95
U2AF1-203ENST00000398137 SYN3O14994 580 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 NARSO43776 548 aaKnown RBP27.25■■□□□ 1.95
U2AF1-203ENST00000398137 AFPP02771 609 aaKnown RBP27.25■■□□□ 1.95
U2AF1-203ENST00000398137 HNRNPA1P09651 372 aaKnown RBP eCLIP27.25■■□□□ 1.95
U2AF1-203ENST00000398137 ODC1P11926 461 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 HOXA9P31269 272 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 ZNF699Q32M78 642 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 TCP11X2Q5H9J9 407 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 VARS2Q5ST30 1063 aaKnown RBP27.25■■□□□ 1.95
U2AF1-203ENST00000398137 LRSAM1Q6UWE0 723 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 ANKS3Q6ZW76 656 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 GET4Q7L5D6 327 aaPredicted RBP27.25■■□□□ 1.95
U2AF1-203ENST00000398137 SLC7A14Q8TBB6 771 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 TSPY26PQ9H489 355 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 IGSF9Q9P2J2 1179 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 SNX9Q9Y5X1 595 aa27.25■■□□□ 1.95
U2AF1-203ENST00000398137 CYB561D2O14569 222 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 CCL16O15467 120 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 LAMP2P13473 410 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 EEF1GP26641 437 aaKnown RBP27.24■■□□□ 1.95
U2AF1-203ENST00000398137 ATICP31939 592 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 KCNH2Q12809 1159 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 IQCB1Q15051 598 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 PPM1LQ5SGD2 360 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 SLC8B1Q6J4K2 584 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 FBXL13Q8NEE6 735 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 SEMA4DQ92854 862 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 PI4K2AQ9BTU6 479 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 HSD3B7Q9H2F3 369 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 TSC2P49815 1807 aa27.24■■□□□ 1.95
U2AF1-203ENST00000398137 SMTNL1A8MU46 457 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 BECN2A8MW95 431 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 LRRN2O75325 713 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 PRKCSHP14314 528 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-203ENST00000398137 ROR1Q01973 937 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 MAN2A1Q16706 1144 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 LIN9Q5TKA1 542 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 TMEM105Q8N8V8 129 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 APPL2Q8NEU8 664 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 ST13P5Q8NFI4 369 aaPredicted RBP27.23■■□□□ 1.95
U2AF1-203ENST00000398137 TUBGCP2Q9BSJ2 902 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 HCFC1R1Q9NWW0 138 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 GDAP2Q9NXN4 497 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 TAB2Q9NYJ8 693 aa27.23■■□□□ 1.95
U2AF1-203ENST00000398137 WDR27A2RRH5 827 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms