RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 DCAF6Q58WW2 860 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TAPT1Q6NXT6 567 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SLC47A2Q86VL8 602 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ARHGEF19Q8IW93 802 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 RYBPQ8N488 228 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TAB3Q8N5C8 712 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 LRRC52Q8N7C0 313 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF784Q8NCA9 323 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF606Q8WXB4 792 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SENP8Q96LD8 212 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SELENOSQ9BQE4 189 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 NKIRAS1Q9NYS0 192 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 IPO11Q9UI26 975 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 FBXL5Q9UKA1 691 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 IPPQ9Y573 584 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 HEY1Q9Y5J3 304 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 DNAJC25-GNG10A0A024R161 153 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 USP27XA6NNY8 438 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 B4GALT4O60513 344 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TSPAN1O60635 241 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ARHGAP25P42331 645 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PURAQ00577 322 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 C2orf54Q08AI8 447 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 GLE1Q53GS7 698 aaKnown RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 MDH1BQ5I0G3 518 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TRIB2Q92519 343 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 KCNK9Q9NPC2 374 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ARVCFO00192 962 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 CAND2O75155 1236 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 CCL5P13501 91 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 CCND3P30281 292 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 RNF219Q5W0B1 726 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 EPM2AIP1Q7L775 607 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 CTAGE3PQ8IX95 158 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PTPN18Q99952 460 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 FGFBP2Q9BYJ0 223 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 EPB41L5Q9HCM4 733 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 TRPC7Q9HCX4 862 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRD-204ENST00000397606 ANAPC5Q9UJX4 755 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 SIK3Q9Y2K2 1263 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 PCDHB5Q9Y5E4 795 aa8.72□□□□□ -1.01
PTPRD-204ENST00000397606 NCK2O43639 380 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 GRAP2O75791 330 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 NCAM1P13591 858 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 NFKBIAP25963 317 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF200P98182 395 aaPredicted RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 MAPK8IP2Q13387 824 aaPredicted RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF211Q13398 564 aaPredicted RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 CEP120Q8N960 986 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 ARAP2Q8WZ64 1704 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 EMID1Q96A84 441 aaPredicted RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 ZNF558Q96NG5 402 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 FZD8Q9H461 694 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 NXF3Q9H4D5 531 aaKnown RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 BCAS3Q9H6U6 928 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 KRT82Q9NSB4 513 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 TIMM13Q9Y5L4 95 aaPredicted RBP8.71□□□□□ -1.01
PTPRD-204ENST00000397606 MAD1L1Q9Y6D9 718 aa8.71□□□□□ -1.01
PTPRD-204ENST00000397606 CYBBP04839 570 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SLC2A3P11169 496 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SLC12A2P55011 1212 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 TPI1P60174 286 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 MIIPQ5JXC2 388 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 MORN1Q5T089 497 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SLC7A14Q8TBB6 771 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 CDKL2Q92772 493 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 MRRFQ96E11 262 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 THAP2Q9H0W7 228 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 TRPV6Q9H1D0 765 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 METTL5Q9NRN9 209 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 ARHGAP20Q9P2F6 1191 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SF3B1O75533 1304 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 RGS20O76081 388 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 CTNNA1P35221 906 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 CYP4A22Q5TCH4 519 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 KLC2Q9H0B6 622 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 TRMT13Q9NUP7 481 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SNX12Q9UMY4 172 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 PACSIN2Q9UNF0 486 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 NOC2LQ9Y3T9 749 aaKnown RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 ALG6Q9Y672 507 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 H0YHG0 523 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 SRGAP2O75044 1071 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 F9P00740 461 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 CHRNA3P32297 505 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 NNMTP40261 264 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 RECQLP46063 649 aaPredicted RBP8.71□□□□□ -1.02
PTPRD-204ENST00000397606 CDH8P55286 799 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 TUSC3Q13454 348 aa8.71□□□□□ -1.02
PTPRD-204ENST00000397606 DRP2Q13474 957 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms