RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 NAP1L3Q99457 506 aaPredicted RBP16.34■□□□□ 0.21
PPM1F-202ENST00000397495 AVENQ9NQS1 362 aaPredicted RBP16.34■□□□□ 0.21
PPM1F-202ENST00000397495 AGAP1Q9UPQ3 857 aa16.34■□□□□ 0.21
PPM1F-202ENST00000397495 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
PPM1F-202ENST00000397495 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.21
PPM1F-202ENST00000397495 CYP2C18P33260 490 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 MLH1P40692 756 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 ZBTB6Q15916 424 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 XKR4Q5GH76 650 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 AGMOQ6ZNB7 445 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 NECAB2Q7Z6G3 386 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 MRPL10Q7Z7H8 261 aaKnown RBP16.33■□□□□ 0.21
PPM1F-202ENST00000397495 RTN4RL1Q86UN2 441 aaPredicted RBP16.33■□□□□ 0.21
PPM1F-202ENST00000397495 BEST2Q8NFU1 509 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 CXorf38Q8TB03 319 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 GAD1Q99259 594 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 PSD3Q9NYI0 1048 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 CTTNBP2NLQ9P2B4 639 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 ITGA11Q9UKX5 1188 aa16.33■□□□□ 0.21
PPM1F-202ENST00000397495 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 RAD51CO43502 376 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF623O75123 536 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 SYF2O95926 243 aaKnown RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 KCNE1P15382 129 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 ATF7P17544 494 aaPredicted RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 PEX5P50542 639 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 DNA2P51530 1060 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 CUL2Q13617 745 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 UBR7Q8N806 425 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 DBF4BQ8NFT6 615 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 LINC01599Q8WXQ3 324 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 ACP6Q9NPH0 428 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 RGS18Q9NS28 235 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 TMEM39AQ9NV64 488 aa16.33■□□□□ 0.2
PPM1F-202ENST00000397495 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 UBQLN1Q9UMX0 589 aaKnown RBP16.33■□□□□ 0.2
PPM1F-202ENST00000397495 SCN1AP35498 2009 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 KRIT1O00522 736 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 PTGESO14684 152 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 MYBL1P10243 752 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 KRT5P13647 590 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 CTNNA2P26232 953 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
PPM1F-202ENST00000397495 RBP5P82980 135 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 CUL1Q13616 776 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 TAF3Q5VWG9 929 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 ALS2CLQ60I27 953 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 SCARA5Q6ZMJ2 495 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 TRIM72Q6ZMU5 477 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 ECHDC2Q86YB7 292 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 ABHD8Q96I13 439 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 GOLGA2P5Q9HBQ8 144 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 EPB41L5Q9HCM4 733 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
PPM1F-202ENST00000397495 ARL5CA6NH57 179 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 AGPSO00116 658 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 PPEF2O14830 753 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CLTBP09497 229 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SKIP12755 728 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CENPCQ03188 943 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ZNF667Q5HYK9 610 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SLC24A5Q71RS6 500 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ALG3Q92685 438 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 VCPIP1Q96JH7 1222 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 FTHL17Q9BXU8 183 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 NIF3L1Q9GZT8 377 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 RSAD1Q9HA92 442 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 TBX21Q9UL17 535 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 POLIQ9UNA4 740 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 C9IYK1 514 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 XPOTO43592 962 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 KCNA4P22459 653 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 ATICP31939 592 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 TNNT3P45378 269 aaPredicted RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 CARSP49589 748 aaKnown RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SOX4Q06945 474 aaPredicted RBP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 SND1Q7KZF4 910 aaKnown RBP eCLIP16.31■□□□□ 0.2
PPM1F-202ENST00000397495 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
PPM1F-202ENST00000397495 DEFB128Q7Z7B8 93 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms