RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SNX25Q9H3E2 840 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 DPEP3Q9H4B8 488 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 INTUQ9ULD6 942 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 PTPRSQ13332 1948 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 KRT86O43790 486 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 FTLP02792 175 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-203ENST00000397442 H2AFZP0C0S5 128 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 PPIGQ13427 754 aaKnown RBP eCLIP29.25■■■□□ 2.275e-12■■□□□ 13.5
CPNE1-203ENST00000397442 PTPN14Q15678 1187 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 TRIM72Q6ZMU5 477 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 H2AFVQ71UI9 128 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 TMCO2Q7Z6W1 182 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-203ENST00000397442 PASD1Q8IV76 773 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 CRYBG2Q8N1P7 616 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 TMEM86AQ8N2M4 240 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 SUSD3Q96L08 255 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 KIAA1257Q9ULG3 409 aa29.25■■■□□ 2.27
CPNE1-203ENST00000397442 TIMM13Q9Y5L4 95 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-203ENST00000397442 PDGFRBP09619 1106 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 NOMO3P69849 1222 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 FPGSQ05932 587 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 ACAD10Q6JQN1 1059 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 OTOP2Q7RTS6 562 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 LRRC43Q8N309 656 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 C12orf29Q8N999 325 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 TSGA10Q9BZW7 698 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 RC3H2Q9HBD1 1191 aaKnown RBP29.24■■■□□ 2.27
CPNE1-203ENST00000397442 SALL4Q9UJQ4 1053 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 GUCA1BQ9UMX6 200 aa29.24■■■□□ 2.27
CPNE1-203ENST00000397442 PRG3Q9Y2Y8 225 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-203ENST00000397442 O00370 1275 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 NRP1O14786 923 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 CYP11A1P05108 521 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 EPHB4P54760 987 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 CENPCQ03188 943 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 SGO2Q562F6 1265 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 TXLNBQ8N3L3 684 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 ZNF689Q96CS4 500 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-203ENST00000397442 PDCL3Q9H2J4 239 aa29.23■■■□□ 2.27
CPNE1-203ENST00000397442 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.23■■■□□ 2.272e-6■■■■■ 55.4
CPNE1-203ENST00000397442 MED7O43513 233 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 ODC1P11926 461 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 SLC11A1P49279 550 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 NAA35Q5VZE5 725 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 CPA5Q8WXQ8 436 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 LPIN3Q9BQK8 851 aa29.22■■■□□ 2.27
CPNE1-203ENST00000397442 ANKRD62A6NC57 917 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 TMEM253P0C7T8 217 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 CDH5P33151 784 aaPredicted RBP29.21■■■□□ 2.27
CPNE1-203ENST00000397442 CNGA2Q16280 664 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 COL13A1Q5TAT6 717 aaPredicted RBP29.21■■■□□ 2.27
CPNE1-203ENST00000397442 DENND1BQ6P3S1 775 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 ZNF365Q70YC5 407 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 WDTC1Q8N5D0 677 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 ABHD8Q96I13 439 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 TMEM175Q9BSA9 504 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 BTNL10A8MVZ5 291 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 LSM8O95777 96 aaKnown RBP29.21■■■□□ 2.27
CPNE1-203ENST00000397442 SYN1P17600 705 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 HTATIP2Q9BUP3 242 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 THAP2Q9H0W7 228 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 LHX5Q9H2C1 402 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 MARCH5Q9NX47 278 aa29.21■■■□□ 2.27
CPNE1-203ENST00000397442 FGBP02675 491 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 GALTP07902 379 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 ABCB4P21439 1286 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 LHX1P48742 406 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 PPP1R26Q5T8A7 1209 aaPredicted RBP29.2■■■□□ 2.26
CPNE1-203ENST00000397442 KIAA0319Q5VV43 1072 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 SPATA18Q8TC71 538 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 RTP3Q9BQQ7 232 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 CWH43Q9H720 699 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 DDX43Q9NXZ2 648 aaKnown RBP29.2■■■□□ 2.26
CPNE1-203ENST00000397442 PAXBP1Q9Y5B6 917 aa29.2■■■□□ 2.26
CPNE1-203ENST00000397442 MACROD2A1Z1Q3 448 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 MICAL2O94851 1124 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 ALDH2P05091 517 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 LCLAT1Q6UWP7 414 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 ARHGEF26Q96DR7 871 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 FAM49BQ9NUQ9 324 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 PCDHB8Q9UN66 801 aa29.19■■■□□ 2.26
CPNE1-203ENST00000397442 ATP2C2O75185 946 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 ACAT1P24752 427 aaKnown RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 ETF1P62495 437 aaKnown RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TMEM240Q5SV17 173 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 ARHGAP17Q68EM7 881 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 FAM117BQ6P1L5 589 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 C1orf131Q8NDD1 294 aaKnown RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TNIP3Q96KP6 325 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 ADAM28Q9UKQ2 775 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TSPAN16Q9UKR8 245 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 DSEQ9UL01 958 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 FAN1Q9Y2M0 1017 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 FANCGO15287 622 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TNNT1P13805 278 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 TYMPP19971 482 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 PBX3P40426 434 aa29.18■■■□□ 2.26
CPNE1-203ENST00000397442 NSFP46459 744 aaKnown RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 PSMC1P62191 440 aaKnown RBP29.18■■■□□ 2.26
CPNE1-203ENST00000397442 MON1BQ7L1V2 547 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms