RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 KIF4AO95239 1232 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 ITGB1P05556 798 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 PAX3P23760 479 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 DPH6Q7L8W6 267 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 NOP9Q86U38 636 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 LRRC43Q8N309 656 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TOP6BLQ8N6T0 577 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 KBTBD7Q8WVZ9 684 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 SENP8Q96LD8 212 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CCDC42Q96M95 316 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 MRPL45Q9BRJ2 306 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 HMGXB4Q9UGU5 601 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 BARX2Q9UMQ3 279 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 EPN1Q9Y6I3 576 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 VWA8A3KMH1 1905 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 C5orf67F2Z3F1 127 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CYB561D2O14569 222 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 NDUFA10O95299 355 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CALCAP01258 141 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CYP11B1P15538 503 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 OR1G1P47890 313 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 PDE6CP51160 858 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 KIF11P52732 1056 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 RAD23BP54727 409 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 BPIFB4P59827 614 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 GPM6BQ13491 265 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CAMK1Q14012 370 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TIGD5Q53EQ6 642 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TOGARAM2Q6ZUX3 1019 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 FIBCD1Q8N539 461 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 APPL2Q8NEU8 664 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC20A1Q8WUM9 679 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 DDX1Q92499 740 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 MRPL38Q96DV4 380 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 TWNKQ96RR1 684 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 ELOVL4Q9GZR5 314 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 CWH43Q9H720 699 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 NME7Q9Y5B8 376 aa18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 MRPL42Q9Y6G3 142 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-205ENST00000397406 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 GRM6O15303 877 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 HUS1O60921 280 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 LCA5LO95447 670 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 FAM163BP0C2L3 166 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 CHRNB2P17787 502 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 ANXA13P27216 316 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 CYLC1P35663 651 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 BMPR1AP36894 532 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 BRCC3P46736 316 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 NDST1P52848 882 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 ZNF394Q53GI3 561 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC4A11Q8NBS3 891 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 LNX1Q8TBB1 728 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 KIAA1524Q8TCG1 905 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 HASPINQ8TF76 798 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 HLA-CQ95604 372 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 SAMD11Q96NU1 681 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 EIF3CQ99613 913 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 AGPAT1Q99943 283 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 TMEM175Q9BSA9 504 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 SPTLC3Q9NUV7 552 aa18.05■□□□□ 0.48
TSPAN4-205ENST00000397406 A0A087X0T9 212 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 M0QZQ0 153 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 NRP1O14786 923 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 ZNF263O14978 683 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 AKR1B10O60218 316 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 PAEPP09466 180 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 FAM228BP0C875 321 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 WARSP23381 471 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 GNA15P30679 374 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC11A1P49279 550 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 BMS1Q14692 1282 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC18A3Q16572 532 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 ZSCAN30Q86W11 494 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 UNC93AQ86WB7 457 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 CMTR2Q8IYT2 770 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 ADGRF2Q8IZF7 708 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 SLC30A5Q8TAD4 765 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 SUSD3Q96L08 255 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 DESI2Q9BSY9 194 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 MARCH5Q9NX47 278 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 NENFQ9UMX5 172 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 COG5Q9UP83 839 aa18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 PRG3Q9Y2Y8 225 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 REXO2Q9Y3B8 237 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-205ENST00000397406 I3L4J1 428 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 DDX3XO00571 662 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■■□ 19.5
TSPAN4-205ENST00000397406 GABRDO14764 452 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 CYP11A1P05108 521 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 GALTP07902 379 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 DNAJB1P25685 340 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 CTNNB1P35222 781 aa18.03■□□□□ 0.48
TSPAN4-205ENST00000397406 FMO1Q01740 532 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms