RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 USTQ9Y2C2 406 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 GVINP1Q7Z2Y8 2422 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 VNN1O95497 513 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 KRT19P08727 400 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 EPCAMP16422 314 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 CLCN5P51795 746 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 FOXK2Q01167 660 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 SFMBT2Q5VUG0 894 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 IQCEQ6IPM2 695 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PHLDB3Q6NSJ2 640 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 GJB7Q6PEY0 223 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 ALKAL1Q6UXT8 129 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 TMEM173Q86WV6 379 aaPredicted RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PPM1KQ8N3J5 372 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 TDRD5Q8NAT2 981 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 BEST2Q8NFU1 509 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 AUTS2Q8WXX7 1259 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 BAP1Q92560 729 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 FAM81BQ96LP2 452 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PI4K2AQ9BTU6 479 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 STK33Q9BYT3 514 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 ITGA11Q9UKX5 1188 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 MYO6Q9UM54 1294 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 MYO15AQ9UKN7 3530 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 XPOTO43592 962 aaKnown RBP14.18□□□□□ -0.14
SEC13-209ENST00000397117 ZNF623O75123 536 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 LRRN2O75325 713 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 CTSAP10619 480 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 MFAP3P55082 362 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 CYP26C1Q6V0L0 522 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 MRPL10Q7Z7H8 261 aaKnown RBP14.18□□□□□ -0.14
SEC13-209ENST00000397117 DDX53Q86TM3 631 aaKnown RBP14.18□□□□□ -0.14
SEC13-209ENST00000397117 FMNL3Q8IVF7 1028 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 ARHGEF19Q8IW93 802 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 FEZF2Q8TBJ5 459 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 SYN2Q92777 582 aaPredicted RBP14.18□□□□□ -0.14
SEC13-209ENST00000397117 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 RPS6KC1Q96S38 1066 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 UBN1Q9NPG3 1134 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 DPP3Q9NY33 737 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 ZKSCAN5Q9Y2L8 839 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 GIT1Q9Y2X7 761 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 C2orf16Q68DN1 1984 aa14.18□□□□□ -0.14
SEC13-209ENST00000397117 SMIM28A0A1B0GU29 152 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 ITGB3P05106 788 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 KCNE1P15382 129 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 STAT1P42224 750 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 NOP14P78316 857 aaKnown RBP14.17□□□□□ -0.14
SEC13-209ENST00000397117 CCZ1BP86790 482 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 CCZ1P86791 482 aaPredicted RBP14.17□□□□□ -0.14
SEC13-209ENST00000397117 ARHGAP44Q17R89 818 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 GLRA4Q5JXX5 417 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 ENOSF1Q7L5Y1 443 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 TMTC1Q8IUR5 882 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 BCL7CQ8WUZ0 217 aaPredicted RBP14.17□□□□□ -0.14
SEC13-209ENST00000397117 RSPH1Q8WYR4 309 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 LPPQ93052 612 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 IGSF21Q96ID5 467 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 NRDE2Q9H7Z3 1164 aa14.17□□□□□ -0.14
SEC13-209ENST00000397117 UBQLN1Q9UMX0 589 aaKnown RBP14.17□□□□□ -0.14
SEC13-209ENST00000397117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.16□□□□□ -0.14
SEC13-209ENST00000397117 ESPNB1AK53 854 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 ASS1P00966 412 aaKnown RBP14.16□□□□□ -0.14
SEC13-209ENST00000397117 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
SEC13-209ENST00000397117 GALTP07902 379 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 CA8P35219 290 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 JAM2P57087 298 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 MYL6P60660 151 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 RBP5P82980 135 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 DRAP1Q14919 205 aaPredicted RBP14.16□□□□□ -0.14
SEC13-209ENST00000397117 ASIC2Q16515 512 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 TAF4BQ92750 862 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 TATDN2Q93075 761 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
SEC13-209ENST00000397117 VN1R3Q9BXE9 311 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 CITO14578 2027 aa14.16□□□□□ -0.14
SEC13-209ENST00000397117 CARNS1A5YM72 827 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 F8VZ95 297 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 ARHGAP6O43182 974 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 CCDC172P0C7W6 258 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 NPR3P17342 541 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 TBXAS1P24557 533 aaPredicted RBP14.15□□□□□ -0.14
SEC13-209ENST00000397117 POLR2BP30876 1174 aaKnown RBP14.15□□□□□ -0.14
SEC13-209ENST00000397117 ATICP31939 592 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 HNRNPH3P31942 346 aaKnown RBP14.15□□□□□ -0.14
SEC13-209ENST00000397117 SOX5P35711 763 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 MLH1P40692 756 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 GCNT1Q02742 428 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 ARID5AQ03989 594 aa14.15□□□□□ -0.14
SEC13-209ENST00000397117 MEA1Q16626 185 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms