RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PLA2G6O60733 806 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 PDHA1P08559 390 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 TMEM191BP0C7N4 346 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 MYCLP12524 364 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 PDIA2Q13087 525 aaKnown RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 NR1H3Q13133 447 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 DMP1Q13316 513 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 LRRC6Q86X45 466 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 AGGF1Q8N302 714 aaeCLIP14.69□□□□□ -0.069e-10■■□□□ 12.9
NUP98-204ENST00000397004 OSBPL1AQ9BXW6 950 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUP98-204ENST00000397004 COL2A1P02458 1487 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 NIPA1Q7RTP0 329 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 PHF13Q86YI8 300 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 SAMD3Q8N6K7 520 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 FBXO27Q8NI29 283 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 ZNF526Q8TF50 670 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 WDR60Q8WVS4 1066 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 PTCD3Q96EY7 689 aaKnown RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 CFAP57Q96MR6 1250 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 DHRS4Q9BTZ2 278 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 RIPK3Q9Y572 518 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 PIK3CAP42336 1068 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 EFHC2Q5JST6 749 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 RIBC1Q8N443 379 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 FEZF2Q8TBJ5 459 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 TCP10LQ8TDR4 215 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 MAIP1Q8WWC4 291 aa14.69□□□□□ -0.06
NUP98-204ENST00000397004 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
NUP98-204ENST00000397004 CST3P01034 146 aaPredicted RBP14.68□□□□□ -0.06
NUP98-204ENST00000397004 GCKP35557 465 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 CDKN2BP42772 138 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
NUP98-204ENST00000397004 C4orf50Q6ZRC1 276 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 SH2D5Q6ZV89 423 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 YIPF3Q9GZM5 350 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 ARHGEF4Q9NR80 690 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 C1orf112Q9NSG2 853 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 ZNF70Q9UC06 446 aaPredicted RBP14.68□□□□□ -0.06
NUP98-204ENST00000397004 ZNRF3Q9ULT6 936 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 FER1L6Q2WGJ9 1857 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 hCG_1818297A0A087WSY0 165 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 MMP8P22894 467 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 GNA15P30679 374 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 GHRHRQ02643 423 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 CUL2Q13617 745 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 ACSBG2Q5FVE4 666 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 THEMIS2Q5TEJ8 643 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 SPOCD1Q6ZMY3 1216 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 CPT1BQ92523 772 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 FAM81BQ96LP2 452 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 METTL5Q9NRN9 209 aaKnown RBP14.68□□□□□ -0.06
NUP98-204ENST00000397004 ZFATQ9P243 1243 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 ARHGAP28Q9P2N2 729 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 FEM1BQ9UK73 627 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 C2CD2LO14523 706 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 TMEM63AO94886 807 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 ATP4AP20648 1035 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 IL1R2P27930 398 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 SHKBP1Q8TBC3 707 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 DCAKDQ8WVC6 231 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 RAB3IPQ96QF0 476 aaPredicted RBP14.68□□□□□ -0.06
NUP98-204ENST00000397004 SMC6Q96SB8 1091 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
NUP98-204ENST00000397004 CD48P09326 243 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 DRICH1Q6PGQ1 229 aaPredicted RBP14.67□□□□□ -0.06
NUP98-204ENST00000397004 LRRC8CQ8TDW0 803 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 MCEEQ96PE7 176 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 PDCD2LQ9BRP1 358 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 GABBR1Q9UBS5 961 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 KIAA1217Q5T5P2 1943 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
NUP98-204ENST00000397004 PPP1R15BQ5SWA1 713 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 FOXB2Q5VYV0 432 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 RINLQ6ZS11 566 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 BANPQ8N9N5 519 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 SLC35B2Q8TB61 432 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 IWS1Q96ST2 819 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 CCDC77Q9BR77 488 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 NMRK1Q9NWW6 199 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 CNTN6Q9UQ52 1028 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 IFNB1P01574 187 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 ATP6V1C1P21283 382 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 SLC45A4Q5BKX6 768 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 KCNT1Q5JUK3 1230 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 ZNF677Q86XU0 584 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 KBTBD2Q8IY47 623 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.67□□□□□ -0.06
NUP98-204ENST00000397004 RBBP8NLQ8NC74 664 aaPredicted RBP14.67□□□□□ -0.06
NUP98-204ENST00000397004 ZNF606Q8WXB4 792 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 SERAC1Q96JX3 654 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 ANKEF1Q9NU02 776 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 LNPEPQ9UIQ6 1025 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 PCDHB4Q9Y5E5 795 aa14.67□□□□□ -0.06
NUP98-204ENST00000397004 TESPA1A2RU30 521 aaPredicted RBP14.66□□□□□ -0.06
NUP98-204ENST00000397004 KRT36O76013 467 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 KRT1P04264 644 aa14.66□□□□□ -0.06
NUP98-204ENST00000397004 TNNI1P19237 187 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms