RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RPN2P04844 631 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 S100A6P06703 90 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 GRIK1P39086 918 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ZNF185O15231 689 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 RTN2O75298 545 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ECDO95905 644 aaPredicted RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 POLBP06746 335 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ZMYM1Q5SVZ6 1142 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 BTBD8Q5XKL5 378 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 DHX40Q8IX18 779 aaKnown RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 KRT35Q92764 455 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ZFRQ96KR1 1074 aaKnown RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 SENP7Q9BQF6 1050 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 RPS6KB2Q9UBS0 482 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ALDH1A2O94788 518 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 TYW3Q6IPR3 259 aaKnown RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 POLR3FQ9H1D9 316 aaPredicted RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ATP6V1HQ9UI12 483 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 ALOX12P18054 663 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CDC73Q6P1J9 531 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 HMG20AQ9NP66 347 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 PPP2R3BQ9Y5P8 575 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 PTRHD1Q6GMV3 140 aaKnown RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 FAM129BQ96TA1 746 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 PSMD3O43242 534 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 POU1F1P28069 291 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 HNMTP50135 292 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 CORO7P57737 925 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 AP3B2Q13367 1082 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 TSHZ1Q6ZSZ6 1077 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 PEG10Q86TG7 708 aaKnown RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 RMND5BQ96G75 393 aaPredicted RBP10.74□□□□□ -0.69
COL4A4-201ENST00000396625 SLC25A13Q9UJS0 675 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 RCOR1Q9UKL0 485 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 DOLKQ9UPQ8 538 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 REREQ9P2R6 1566 aa10.74□□□□□ -0.69
COL4A4-201ENST00000396625 POTEMA6NI47 508 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CCNIQ14094 377 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 HEATR9A2RTY3 570 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SSNA1O43805 119 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SPAG6O75602 509 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 S100A1P23297 94 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 HNRNPH1P31943 449 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ANXA11P50995 505 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 UBE3CQ15386 1083 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 KNOP1Q1ED39 458 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PID1Q7Z2X4 250 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 RAD54LQ92698 747 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 MCEEQ96PE7 176 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 KCTD14Q9BQ13 255 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PZPP20742 1482 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 WARSP23381 471 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ITGA3P26006 1051 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PRELPP51888 382 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CACNB2Q08289 660 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 TAF2Q6P1X5 1199 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 C3orf62Q6ZUJ4 267 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 XPO6Q96QU8 1125 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 EPC1Q9H2F5 836 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 FAM47E-STBD1D6RA91 191 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PPEF1O14829 653 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ITGB3BPQ13352 177 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SYTL1Q8IYJ3 562 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PPP2R3CQ969Q6 453 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 RAB6BQ9NRW1 208 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 UTYO14607 1347 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SLC10A4Q96EP9 437 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ENTPD7Q9NQZ7 604 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 KRT34O76011 436 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 DDHD2O94830 711 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CCDC130P13994 396 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ALOX15P16050 662 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SPRP35270 261 aaPredicted RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 EIF2S3P41091 472 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ARHGEF7Q14155 803 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 MACC1Q6ZN28 852 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 MNTQ99583 582 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 INTS2Q9H0H0 1204 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PNMA8CA0A1B0GUJ8 204 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SLC16A4O15374 487 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PARNO95453 639 aaKnown RBP10.73□□□□□ -0.69
COL4A4-201ENST00000396625 AKR1D1P51857 326 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 PGS1Q32NB8 556 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 CYB5D1Q6P9G0 228 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 ENOSF1Q7L5Y1 443 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 SPATA18Q8TC71 538 aa10.73□□□□□ -0.69
COL4A4-201ENST00000396625 RMND5AQ9H871 391 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms