RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DNAJB4Q9UDY4 337 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 PCDHGC3Q9UN70 934 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 STXBP5LQ9Y2K9 1186 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 KIF4AO95239 1232 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 TUBB4AP04350 444 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 ODC1P11926 461 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 BRCC3P46736 316 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 GNG11P61952 73 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 NAA35Q5VZE5 725 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 CD300LGQ6UXG3 332 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 C7orf61Q8IZ16 206 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 CPA5Q8WXQ8 436 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 SECISBP2LQ93073 1101 aaKnown RBP21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 NRDE2Q9H7Z3 1164 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 CEP83Q9Y592 693 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 PAXBP1Q9Y5B6 917 aa21.71■■□□□ 1.07
VCPKMT-202ENST00000395860 I3L4J1 428 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 PDGFRBP09619 1106 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 TMEM253P0C7T8 217 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 LMO2P25791 158 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 NSFP46459 744 aaKnown RBP21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 ETF1P62495 437 aaKnown RBP21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 NOMO3P69849 1222 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 OSTM1Q86WC4 334 aa21.7■■□□□ 1.06
VCPKMT-202ENST00000395860 HCRTO43612 131 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 BAIAP3O94812 1187 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 LSM8O95777 96 aaKnown RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 ITGB1P05556 798 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 NAP1L1P55209 391 aaKnown RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 CENPCQ03188 943 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 PPIGQ13427 754 aaKnown RBP eCLIP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 ZNF569Q5MCW4 686 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 PPP1R2P3Q6NXS1 205 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 SYT10Q6XYQ8 523 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 LRRC43Q8N309 656 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 TOP1MTQ969P6 601 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 THAP2Q9H0W7 228 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 DPEP3Q9H4B8 488 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 MYO1AQ9UBC5 1043 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 PRG3Q9Y2Y8 225 aaPredicted RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 TIMM13Q9Y5L4 95 aaPredicted RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 ARHGEF37A1IGU5 675 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 BTNL10A8MVZ5 291 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 F8W810 466 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 TMEM189-UBE2V1I3L0A0 370 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 M0QZQ0 153 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 GABRDO14764 452 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 DGKIO75912 1065 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 LHX1P48742 406 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 WDR5P61964 334 aaKnown RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 STILQ15468 1287 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 CNGA2Q16280 664 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 METTL23Q86XA0 190 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 C12orf29Q8N999 325 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 TMEM35BQ8NCS4 154 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 ZNF592Q92610 1267 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 BADQ92934 168 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 TNIP3Q96KP6 325 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 SUSD3Q96L08 255 aa21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 DDX43Q9NXZ2 648 aaKnown RBP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.69■■□□□ 1.06
VCPKMT-202ENST00000395860 MYH10P35580 1976 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 O00370 1275 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 ALDH2P05091 517 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 DEFB103AP81534 67 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 FPGSQ05932 587 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 CRYBG2Q8N1P7 616 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 RNF10Q8N5U6 811 aaKnown RBP21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 ZNF518BQ9C0D4 1074 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 DNAI1Q9UI46 699 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 SALL4Q9UJQ4 1053 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 DSEQ9UL01 958 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 PTPRSQ13332 1948 aa21.68■■□□□ 1.06
VCPKMT-202ENST00000395860 NRP1O14786 923 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 BUB1O43683 1085 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 MICAL2O94851 1124 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 MOCS3O95396 460 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 GPC5P78333 572 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 DENND1BQ6P3S1 775 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 OTOP2Q7RTS6 562 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 C1orf131Q8NDD1 294 aaKnown RBP21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 SPATA18Q8TC71 538 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 TMEM175Q9BSA9 504 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 HTATIP2Q9BUP3 242 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 COLEC11Q9BWP8 271 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 LHX5Q9H2C1 402 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 FAM49BQ9NUQ9 324 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 HCSTQ9UBK5 93 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 FAN1Q9Y2M0 1017 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 NCANO14594 1321 aa21.67■■□□□ 1.06
VCPKMT-202ENST00000395860 A0A0A6YYK5 440 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 M0QYV0 167 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 TADA2AO75478 443 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 CYP11A1P05108 521 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 CDH5P33151 784 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 NOP2P46087 812 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 PPP1R26Q5T8A7 1209 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 LCLAT1Q6UWP7 414 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 SLC35F6Q8N357 371 aa21.66■■□□□ 1.06
VCPKMT-202ENST00000395860 ZNF653Q96CK0 615 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms