RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PAX3P23760 479 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 LMO2P25791 158 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ME1P48163 572 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 STK4Q13043 487 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 MLF2Q15773 248 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 BMT2Q1RMZ1 405 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 SDHAF4Q5VUM1 108 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ARMCX5Q6P1M9 558 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 NT5DC4Q86YG4 428 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 CSGALNACT2Q8N6G5 542 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 KIAA0895Q8NCT3 520 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 PJA1Q8NG27 643 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ZSCAN18Q8TBC5 510 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 KBTBD7Q8WVZ9 684 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 SMARCD2Q92925 531 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 PSMG2Q969U7 264 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ELMO3Q96BJ8 720 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 PAGE5Q96GU1 130 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 BCO2Q9BYV7 579 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 GOLPH3LQ9H4A5 285 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 TMEM206Q9H813 350 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 SLC39A2Q9NP94 309 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 ASAH2Q9NR71 780 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 HEBP1Q9NRV9 189 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 GDAP2Q9NXN4 497 aa9.54□□□□□ -0.88
ATG4A-205ENST00000394892 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
ATG4A-205ENST00000394892 PDCD11Q14690 1871 aaKnown RBP9.53□□□□□ -0.88
ATG4A-205ENST00000394892 FAM237AA0A1B0GTK4 181 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 A0A1B0GVL5 298 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 KANSL1LA0AUZ9 987 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 MYBPHLA2RUH7 354 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 ZNF197O14709 1029 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 TADA3O75528 432 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 PRAMEF12O95522 483 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 LDHAP00338 332 aaKnown RBP9.53□□□□□ -0.88
ATG4A-205ENST00000394892 F11P03951 625 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 SLFN14P0C7P3 912 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 PFKFB1P16118 471 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 HOXC13P31276 330 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 CASP4P49662 377 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 CYP4F8P98187 520 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 PFKPQ01813 784 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 BFSP1Q12934 665 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 SV2CQ496J9 727 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 CYP4A22Q5TCH4 519 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 LRRC52Q8N7C0 313 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 NOC3LQ8WTT2 800 aaKnown RBP9.53□□□□□ -0.88
ATG4A-205ENST00000394892 ATRIPQ8WXE1 791 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 ZFP14Q9HCL3 533 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 LTB4R2Q9NPC1 389 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 DMAC2Q9NW81 257 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 NCDNQ9UBB6 729 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 HSFX1Q9UBD0 423 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 ITGA11Q9UKX5 1188 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 DSEQ9UL01 958 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 SNX9Q9Y5X1 595 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 FAM186AA6NE01 2351 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 GPR179Q6PRD1 2367 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 CITO14578 2027 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 SCN1AP35498 2009 aa9.53□□□□□ -0.88
ATG4A-205ENST00000394892 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 ZNF233A6NK53 670 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 LAMTOR5O43504 91 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CMA1P23946 247 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CYP2F1P24903 491 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 GABRR2P28476 465 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 ALDH1A3P47895 512 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SOX9P48436 509 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CYP2J2P51589 502 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 NDUFA8P51970 172 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 EPHB3P54753 998 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 RBP5P82980 135 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 PRKCQQ04759 706 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CYP24A1Q07973 514 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 PSMD6Q15008 389 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 SNRNP35Q16560 246 aaKnown RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 DDR2Q16832 855 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 KMT5BQ4FZB7 885 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 C1orf220Q5T0J3 134 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 FAM171BQ6P995 826 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 TRAPPC11Q7Z392 1133 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-205ENST00000394892 MFSD6LQ8IWD5 586 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 LEMD2Q8NC56 503 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CLDN23Q96B33 292 aa9.52□□□□□ -0.89
ATG4A-205ENST00000394892 CHFRQ96EP1 664 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms