RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SMG5Q9UPR3 1016 aaKnown RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 M0QYT0 321 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 AP1G2O75843 785 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 EPB42P16452 691 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 FBXO16Q8IX29 292 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF555Q8NEP9 628 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 SEPT8Q92599 483 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 OSBPL8Q9BZF1 889 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 CDYLQ9Y232 598 aa10.84□□□□□ -0.67
COL4A6-203ENST00000394872 SSU72P8A0A1W2PR75 194 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MYO1GB0I1T2 1018 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ASS1P00966 412 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 COMTP21964 271 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HNRNPH2P55795 449 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HPCAP84074 193 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ARRDC4Q8NCT1 418 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 F5H5T6 163 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 B3GAT3O94766 335 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 SEC24DO94855 1032 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 EGFRP00533 1210 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 VTNP04004 478 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 SLC2A3P11169 496 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 PGM1P36871 562 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 TTC39BQ5VTQ0 682 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ERO1BQ86YB8 467 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CPB2Q96IY4 423 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 KIF2CQ99661 725 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CAMSAP1Q5T5Y3 1602 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MSH4O15457 936 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CST8O60676 142 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ALDH1A2O94788 518 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 KLRK1P26718 216 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 EPHB2P29323 1055 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 SPATA21Q7Z572 469 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 FBXO32Q969P5 355 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 C17orf80Q9BSJ5 609 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MRPL1Q9BYD6 325 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ZNF556Q9HAH1 456 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 NPHS2Q9NP85 383 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 P4HA2O15460 535 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HOXA2O43364 376 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 AGTP01019 485 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 GCLCP48506 637 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 KLK7P49862 253 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 ATN1P54259 1190 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HIST2H2ACQ16777 129 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HIST2H2AA3Q6FI13 130 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CARNMT1Q8N4J0 409 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MRPS31Q92665 395 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 FAM162AQ96A26 154 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 PRMT6Q96LA8 375 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 MROH8Q9H579 483 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 DDIT4Q9NX09 232 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 TUBE1Q9UJT0 475 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 PITPNM2Q9BZ72 1349 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 VCAM1P19320 739 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 CAPZA2P47755 286 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 NAPEPLDQ6IQ20 393 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 GJB7Q6PEY0 223 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 RPRD1AQ96P16 312 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 BRD8Q9H0E9 1235 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 GOLPH3Q9H4A6 298 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 HPS4Q9NQG7 708 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.68
COL4A6-203ENST00000394872 TECPR2O15040 1411 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 NEXMIFQ5QGS0 1516 aa10.83□□□□□ -0.68
COL4A6-203ENST00000394872 KRT87PA6NCN2 255 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MTSS1O43312 755 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 PTGER2P43116 358 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 RAD23BP54727 409 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ANTXR2P58335 489 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ORC1Q13415 861 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CUL2Q13617 745 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 TJAP1Q5JTD0 557 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 KCTD17Q8N5Z5 321 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 UCMAQ8WVF2 138 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 BTN2A2Q8WVV5 523 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ADNPQ9H2P0 1102 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MYO3AQ8NEV4 1616 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CFAP73A6NFT4 308 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CYB561D2O14569 222 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 H2AFYO75367 372 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 FKBP9O95302 570 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 URODP06132 367 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ENO3P13929 434 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 NCALDP61601 193 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 SFSWAPQ12872 951 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C3orf62Q6ZUJ4 267 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 FKBP9P1Q75LS8 142 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms