RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PSMD14O00487 310 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 FKBP6O75344 327 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 TUBA3EQ6PEY2 450 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 MSANTD1Q6ZTZ1 278 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP49-203ENST00000394253 C17orf50Q8WW18 174 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 ZNF408Q9H9D4 720 aa13.95□□□□□ -0.18
USP49-203ENST00000394253 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 SCRN1Q12765 414 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CASP12Q6UXS9 341 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 VN1R5Q7Z5H4 357 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CLCC1Q96S66 551 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 TMEM138Q9NPI0 162 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 H0YIN7 160 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 TARSP26639 723 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 GNA15P30679 374 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 OR6B3Q8NGW1 331 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 ARHGEF26Q96DR7 871 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 TIMM44O43615 452 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 NFICP08651 508 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 SCP2P22307 547 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 AKT1P31749 480 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 HNRNPH1P31943 449 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 FAM47AQ5JRC9 791 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 S100ZQ8WXG8 99 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 DGCR14Q96DF8 476 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 EURLQ9NYK6 297 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 RPS6KB2Q9UBS0 482 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 MLXQ9UH92 298 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 NPR2P20594 1047 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 GUCY1A2P33402 732 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 IFNGR2P38484 337 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 MTTPP55157 894 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 EIF3EP60228 445 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 CCNIQ14094 377 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 ADCK2Q7Z695 626 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 COMMD2Q86X83 199 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 NUAK2Q9H093 628 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 SIK3Q9Y2K2 1263 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 MYL12BO14950 172 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CLDN3O15551 220 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 HPGDP15428 266 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 TRAF2Q12933 501 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CHRNA2Q15822 529 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 ERICH5Q6P6B1 374 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 TRPV3Q8NET8 790 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 CYP2D6P10635 497 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 PTK7Q13308 1070 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 SYTL1Q8IYJ3 562 aa13.94□□□□□ -0.18
USP49-203ENST00000394253 RNPC3Q96LT9 517 aaKnown RBP13.94□□□□□ -0.18
USP49-203ENST00000394253 TRIM66O15016 1216 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 PABPC1P11940 636 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 ATG16L2Q8NAA4 619 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 RBM15Q96T37 977 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP49-203ENST00000394253 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP49-203ENST00000394253 FOSL1P15407 271 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ERFP50548 548 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 CDH6P55285 790 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 LRRC47Q8N1G4 583 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 GPD1LQ8N335 351 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 TTC29Q8NA56 475 aaPredicted RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 CHCHD6Q9BRQ6 235 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 PCIF1Q9H4Z3 704 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 SAMSN1Q9NSI8 373 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 JAK3P52333 1124 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 KYAT1Q16773 422 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 OTOAQ7RTW8 1153 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 TSR3Q9UJK0 312 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 KIAA0100Q14667 2235 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 AREL1O15033 823 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 PHGDHO43175 533 aaKnown RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 SPATA4Q8NEY3 305 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 RFFLQ8WZ73 363 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.93□□□□□ -0.18
USP49-203ENST00000394253 GNPATO15228 680 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 VAMP4O75379 141 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 CCDC153Q494R4 210 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 B3GNT6Q6ZMB0 384 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 EHD1Q9H4M9 534 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ZNF879B4DU55 563 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 ATP6V1B2P21281 511 aa13.93□□□□□ -0.18
USP49-203ENST00000394253 MTERF2Q49AM1 385 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms