RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 GDF3Q9NR23 364 aa13.14□□□□□ -0.31
TUBD1-205ENST00000394239 COG5Q9UP83 839 aa13.14□□□□□ -0.31
TUBD1-205ENST00000394239 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 CCDC188H7C350 402 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 KRIT1O00522 736 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 TLL1O43897 1013 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 CA3P07451 260 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 GLI1P08151 1106 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 MMEP08473 750 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 DNAJB2P25686 324 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 AXLP30530 894 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBD1-205ENST00000394239 FMO1Q01740 532 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 BIRC3Q13489 604 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-205ENST00000394239 C11orf63Q6NUN7 778 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 C15orf39Q6ZRI6 1047 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 ZNF771Q7L3S4 317 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-205ENST00000394239 NPAS4Q8IUM7 802 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 CEP120Q8N960 986 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 TATDN2Q93075 761 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-205ENST00000394239 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 IPPQ9Y573 584 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 COL6A3P12111 3177 aa13.13□□□□□ -0.31
TUBD1-205ENST00000394239 A0A0B4J269 797 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 DDX3YO15523 660 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZNF623O75123 536 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 HLA-DRAP01903 254 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 PROZP22891 400 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 SMAD3P84022 425 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 NNTQ13423 1086 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZACNQ401N2 412 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZBTB33Q86T24 672 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 RAD9AQ99638 391 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 APOL6Q9BWW8 343 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 AP1M1Q9BXS5 423 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 MRPL4Q9BYD3 311 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CDT1Q9H211 546 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 EPB41L5Q9HCM4 733 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TMEM161AQ9NX61 479 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TNFSF13BQ9Y275 285 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 PCDHB7Q9Y5E2 793 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 MIF4GDA9UHW6 222 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 RAD51CO43502 376 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 AKAP5P24588 427 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CLUL1Q15846 466 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TDRD10Q5VZ19 366 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CRELD2Q6UXH1 353 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 MRPL10Q7Z7H8 261 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 IFT81Q8WYA0 676 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CAVIN3Q969G5 261 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CASD1Q96PB1 797 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 YME1L1Q96TA2 773 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 NAP1L3Q99457 506 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CGRRF1Q99675 332 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 CARD9Q9H257 536 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 VPS18Q9P253 973 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 TTC7AQ9ULT0 858 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-205ENST00000394239 PCDHA11Q9Y5I1 949 aa13.12□□□□□ -0.31
TUBD1-205ENST00000394239 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 CLDN3O15551 220 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 MTA2O94776 668 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 CYP1A2P05177 515 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 BPIFB4P59827 614 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-205ENST00000394239 DDX1Q92499 740 aaKnown RBP13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ZBTB9Q96C00 473 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 FAM84AQ96KN4 292 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-205ENST00000394239 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 GTF3C4Q9UKN8 822 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 INSL6Q9Y581 213 aa13.11□□□□□ -0.31
TUBD1-205ENST00000394239 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms