RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 MMS19Q96T76 1030 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 KXD1Q9BQD3 176 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 ACBD6Q9BR61 282 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 MFSD1Q9H3U5 465 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 TMLHEQ9NVH6 421 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 TRAF3IP3Q9Y228 551 aa32.99■■■□□ 2.87
CMTM4-202ENST00000394106 NRG2O14511 850 aaPredicted RBP32.98■■■□□ 2.87
CMTM4-202ENST00000394106 HCRTO43612 131 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 SRFP11831 508 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 GJA1P17302 382 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 LHX1P48742 406 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 GUF1Q8N442 669 aaKnown RBP32.98■■■□□ 2.87
CMTM4-202ENST00000394106 PARD3BQ8TEW8 1205 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 FRMD4BQ9Y2L6 1034 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 PCDHB5Q9Y5E4 795 aa32.98■■■□□ 2.87
CMTM4-202ENST00000394106 LRRIQ3A6PVS8 624 aaPredicted RBP32.97■■■□□ 2.87
CMTM4-202ENST00000394106 EPHA5P54756 1037 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 BIRC3Q13489 604 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 INTS6LQ5JSJ4 861 aaKnown RBP32.97■■■□□ 2.87
CMTM4-202ENST00000394106 POTEHQ6S545 545 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 SMYD4Q8IYR2 804 aaPredicted RBP32.97■■■□□ 2.87
CMTM4-202ENST00000394106 SPATA18Q8TC71 538 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 LPIN3Q9BQK8 851 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 RMND1Q9NWS8 449 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 ASB3Q9Y575 518 aa32.97■■■□□ 2.87
CMTM4-202ENST00000394106 MICAL2O94851 1124 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 CLSTN1O94985 981 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 HAPLN1P10915 354 aaPredicted RBP32.96■■■□□ 2.87
CMTM4-202ENST00000394106 PCSK1P29120 753 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 MYL6P60660 151 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 NFE2Q16621 373 aaPredicted RBP32.96■■■□□ 2.87
CMTM4-202ENST00000394106 DPH6Q7L8W6 267 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 DNAJB7Q7Z6W7 309 aaPredicted RBP32.96■■■□□ 2.87
CMTM4-202ENST00000394106 SIX5Q8N196 739 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 ERCC4Q92889 916 aaPredicted RBP32.96■■■□□ 2.87
CMTM4-202ENST00000394106 PI4K2AQ9BTU6 479 aa32.96■■■□□ 2.87
CMTM4-202ENST00000394106 GABRDO14764 452 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 MOSPD3O75425 235 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 ATF6P18850 670 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 NR2F2P24468 414 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 VCPP55072 806 aaKnown RBP32.95■■■□□ 2.87
CMTM4-202ENST00000394106 DLG4P78352 724 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 VEPH1Q14D04 833 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 TEAD2Q15562 447 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 TDRD10Q5VZ19 366 aaKnown RBP32.95■■■□□ 2.87
CMTM4-202ENST00000394106 LIMS2Q7Z4I7 341 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 ITIH5Q86UX2 942 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 TMC8Q8IU68 726 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 SHKBP1Q8TBC3 707 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 GIPC2Q8TF65 315 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 KBTBD7Q8WVZ9 684 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 PSMG2Q969U7 264 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 LRRC3Q9BY71 257 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 GTF3C4Q9UKN8 822 aa32.95■■■□□ 2.87
CMTM4-202ENST00000394106 SMC2O95347 1197 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 AP3M2P53677 418 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 TNNC1P63316 161 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 CCDC142Q17RM4 750 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 WDR72Q3MJ13 1102 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 GPR152Q8TDT2 470 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 TIGD1Q96MW7 591 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 ZNF334Q9HCZ1 680 aaPredicted RBP32.94■■■□□ 2.86
CMTM4-202ENST00000394106 HOOK1Q9UJC3 728 aaKnown RBP32.94■■■□□ 2.86
CMTM4-202ENST00000394106 CA14Q9ULX7 337 aa32.94■■■□□ 2.86
CMTM4-202ENST00000394106 KMT2EQ8IZD2 1858 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 A0A1W2PRU2 124 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 CLDN10P78369 228 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 TAF12Q16514 161 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 FAM78AQ5JUQ0 283 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 FLCNQ8NFG4 579 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 ZSWIM3Q96MP5 696 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 PKMYT1Q99640 499 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 SLITRK6Q9H5Y7 841 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 NXF1Q9UBU9 619 aaKnown RBP32.93■■■□□ 2.86
CMTM4-202ENST00000394106 WNT16Q9UBV4 365 aa32.93■■■□□ 2.86
CMTM4-202ENST00000394106 WARSP23381 471 aaKnown RBP32.92■■■□□ 2.86
CMTM4-202ENST00000394106 LMO2P25791 158 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 PSMC1P62191 440 aaKnown RBP32.92■■■□□ 2.86
CMTM4-202ENST00000394106 GPC5P78333 572 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 NFIL3Q16649 462 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 TMC2Q8TDI7 906 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 SMARCE1Q969G3 411 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 SYAP1Q96A49 352 aaPredicted RBP32.92■■■□□ 2.86
CMTM4-202ENST00000394106 GSDMAQ96QA5 445 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 SYT15Q9BQS2 421 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 MRPL45Q9BRJ2 306 aaKnown RBP32.92■■■□□ 2.86
CMTM4-202ENST00000394106 SNX25Q9H3E2 840 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 SLC2A4RGQ9NR83 387 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 PCDHA5Q9Y5H7 936 aa32.92■■■□□ 2.86
CMTM4-202ENST00000394106 ZNF318Q5VUA4 2279 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 MYBPHLA2RUH7 354 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 ATP2C2O75185 946 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 GADD45BO75293 160 aaPredicted RBP32.91■■■□□ 2.86
CMTM4-202ENST00000394106 ECI2O75521 394 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 PDGFRBP09619 1106 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 RPL13P26373 211 aaKnown RBP32.91■■■□□ 2.86
CMTM4-202ENST00000394106 AVPR2P30518 371 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 ATICP31939 592 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 GPR15P49685 360 aa32.91■■■□□ 2.86
CMTM4-202ENST00000394106 TANGO2Q6ICL3 276 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms