RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 PROSCO94903 275 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 STX3Q13277 289 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 KDM7AQ6ZMT4 941 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 C4orf33Q8N1A6 199 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SLC7A14Q8TBB6 771 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
CLTC-202ENST00000393043 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLTC-202ENST00000393043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■□□□□ 10.2
CLTC-202ENST00000393043 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
CLTC-202ENST00000393043 C17orf102A2RUQ5 167 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 RPLP2P05387 115 aaKnown RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 PDK2Q15119 407 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 CCDC138Q96M89 665 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 FRMD3A2A2Y4 597 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 RARGP13631 454 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 CLCN3P51790 818 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 SLC12A3P55017 1021 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 TFDP3Q5H9I0 405 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 TTC39BQ5VTQ0 682 aaPredicted RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 EXD1Q8NHP7 514 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 SEC16BQ96JE7 1060 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 MRGBPQ9NV56 204 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 UBA6A0AVT1 1052 aaPredicted RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 WNT10BO00744 389 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 HUNKP57058 714 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 GEMIN4P57678 1058 aaKnown RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 CLEC16AQ2KHT3 1053 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 SPATC1LQ9H0A9 340 aa13.21□□□□□ -0.29
CLTC-202ENST00000393043 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
CLTC-202ENST00000393043 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.3
CLTC-202ENST00000393043 TRPA1O75762 1119 aa13.21□□□□□ -0.3
CLTC-202ENST00000393043 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.3
CLTC-202ENST00000393043 CXCL11O14625 94 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 RFC1P35251 1148 aaPredicted RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 FDFT1P37268 417 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 EFHBQ8N7U6 833 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 FAM71DQ8N9W8 422 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CALML6Q8TD86 181 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 KLC4Q9NSK0 619 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 PJA2O43164 708 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 FGRP09769 529 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 RRM1P23921 792 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 RGS2P41220 211 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 GCNT1Q02742 428 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 PTGISQ16647 500 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 IMPG1Q17R60 797 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 AGGF1Q8N302 714 aaeCLIP13.2□□□□□ -0.37e-7■□□□□ 8
CLTC-202ENST00000393043 N4BP2L2Q92802 583 aaPredicted RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 FAF1Q9UNN5 650 aaPredicted RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 CAMTA1Q9Y6Y1 1673 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 KBTBD13C9JR72 458 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 NKRFO15226 690 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLTC-202ENST00000393043 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CYFIP2Q96F07 1278 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 MRC1P22897 1456 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 VGLL3A8MV65 326 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CSPG5O95196 566 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CYP3A7P24462 503 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 PLA2G4AP47712 749 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 SREBF2Q12772 1141 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 NAPEPLDQ6IQ20 393 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 SARS2Q9NP81 518 aaKnown RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
CLTC-202ENST00000393043 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.2□□□□□ -0.3
CLTC-202ENST00000393043 SLC47A2Q86VL8 602 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 ATXN7L3BQ96GX2 97 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 CISHQ9NSE2 258 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 DPYSL4O14531 572 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 PEX19P40855 299 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 CACNB2Q08289 660 aaPredicted RBP13.19□□□□□ -0.3
CLTC-202ENST00000393043 CCNG2Q16589 344 aa13.19□□□□□ -0.3
CLTC-202ENST00000393043 TAS2R42Q7RTR8 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms