RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 SND1Q7KZF4 910 aaKnown RBP eCLIP18.73■□□□□ 0.59
SHTN1-203ENST00000392901 IFT20Q8IY31 132 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 CASKIN2Q8WXE0 1202 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 IFT81Q8WYA0 676 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 CASP8AP2Q9UKL3 1982 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 SCN1AP35498 2009 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 RPL7AP62424 266 aaKnown RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 PCSK9Q8NBP7 692 aaKnown RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 FEZF2Q8TBJ5 459 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 GOLGA2P5Q9HBQ8 144 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 DDX20Q9UHI6 824 aaKnown RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 CYTH4Q9UIA0 394 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 NFU1Q9UMS0 254 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 CCDC188H7C350 402 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 CTNNA2P26232 953 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 RWDD2BP57060 319 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 INCA1Q0VD86 236 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 SEL1L2Q5TEA6 688 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 NAP1L3Q99457 506 aaPredicted RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 MRPL45Q9BRJ2 306 aaKnown RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
SHTN1-203ENST00000392901 LHX5Q9H2C1 402 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 AMACRQ9UHK6 382 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 USTQ9Y2C2 406 aa18.72■□□□□ 0.59
SHTN1-203ENST00000392901 MICAL2O94851 1124 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 PROSCO94903 275 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 VDRP11473 427 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 SLC1A1P43005 524 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 LLGL1Q15334 1064 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 PTPN20Q4JDL3 420 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 DNAJC24Q6P3W2 148 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 RNF180Q86T96 592 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 LRRC52Q8N7C0 313 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 NT5C1AQ9BXI3 368 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 OSBPL7Q9BZF2 842 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 VIPAS39Q9H9C1 493 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 ERVK-5Q9HDB9 667 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 TJP2Q9UDY2 1190 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 M0QYV0 167 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 CD4P01730 458 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 KCNE1P15382 129 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 CST5P28325 142 aaPredicted RBP18.71■□□□□ 0.59
SHTN1-203ENST00000392901 EPHB4P54760 987 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
SHTN1-203ENST00000392901 SGO2Q562F6 1265 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 SMYD5Q6GMV2 418 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 DCUN1D2Q6PH85 259 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 C12orf29Q8N999 325 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.71■□□□□ 0.59
SHTN1-203ENST00000392901 UBA3Q8TBC4 463 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 UBE2Q2Q8WVN8 375 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 ZFP42Q96MM3 310 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 MCEEQ96PE7 176 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 CFHR5Q9BXR6 569 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHTN1-203ENST00000392901 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
SHTN1-203ENST00000392901 RALGAPA2Q2PPJ7 1873 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 MEIS3P2A8K0S8 358 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 XPOTO43592 962 aaKnown RBP18.7■□□□□ 0.58
SHTN1-203ENST00000392901 FAM153BP0C7A2 387 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 ATF7P17544 494 aaPredicted RBP18.7■□□□□ 0.58
SHTN1-203ENST00000392901 SSR1P43307 286 aaKnown RBP18.7■□□□□ 0.58
SHTN1-203ENST00000392901 HTRA3P83110 453 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 ITGA7Q13683 1181 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 TERF2Q15554 542 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 FAM153CQ494X1 144 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 FBXO47Q5MNV8 452 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 AGO3Q9H9G7 860 aaKnown RBP18.7■□□□□ 0.58
SHTN1-203ENST00000392901 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
SHTN1-203ENST00000392901 FAM153AQ9UHL3 310 aa18.7■□□□□ 0.58
SHTN1-203ENST00000392901 GOLGA8SH3BPF8 625 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 O00370 1275 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 PIRO00625 290 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 VEGFBP49765 207 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 MGAT3Q09327 533 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 CNGA2Q16280 664 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 TTC39CQ8N584 583 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 OR6B3Q8NGW1 331 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 CPXM1Q96SM3 734 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 FAM105AQ9NUU6 356 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 TCRBV5S1A1TA0A578 114 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 TMEM191CA6NGB0 347 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 IBSPP21815 317 aaPredicted RBP18.69■□□□□ 0.58
SHTN1-203ENST00000392901 GYS2P54840 703 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 ACOT1Q86TX2 421 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 DDX42Q86XP3 938 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHTN1-203ENST00000392901 ZDHHC14Q8IZN3 488 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 C18orf8Q96DM3 657 aa18.69■□□□□ 0.58
SHTN1-203ENST00000392901 KPNA7A9QM74 516 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 GPR182O15218 404 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 SPTLC1O15269 473 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 TTI1O43156 1089 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 GHRP10912 638 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 GJC1P36383 396 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 ACLYP53396 1101 aa18.68■□□□□ 0.58
SHTN1-203ENST00000392901 GPS2Q13227 327 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms