RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CTSVO60911 334 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RNGTTO60942 597 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM20BO75063 409 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TMCC2O75069 709 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FKTNO75072 461 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FZD7O75084 574 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 N4BP1O75113 896 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PTCD1O75127 700 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CPNE3O75131 537 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBED4O75132 1171 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB11FIP3O75154 756 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PHACTR2O75167 634 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP6R2O75170 966 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAJB6O75190 326 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 USP12O75317 370 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUSP11O75319 330 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF217O75362 1048 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 H2AFYO75367 372 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ULK1O75385 1050 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NME6O75414 186 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXO24O75426 580 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PMPCBO75439 489 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FRAT2O75474 233 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TAF5LO75529 589 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ITGA10O75578 1167 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FOXH1O75593 365 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DEDDO75618 318 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CREG1O75629 220 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS6KA4O75676 772 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RFPL1O75677 317 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RFPL3O75679 317 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GJB3O75712 270 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF189O75820 626 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TUSC2O75896 110 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SMNDC1O75940 238 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM155BO75949 473 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLRX3O76003 335 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT33AO76009 404 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT36O76013 467 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NCR1O76036 304 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NEURL1O76050 574 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ALDH1A2O94788 518 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKD3O94806 890 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KBTBD11O94819 623 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IPO13O94829 963 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DDHD2O94830 711 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TOX4O94842 621 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SORBS2O94875 1100 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SASH1O94885 1247 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF432O94892 652 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPF6O94906 941 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLITRK3O94933 977 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXO21O94952 628 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RHOBTB3O94955 611 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 AP2A2O94973 939 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SEC31AO94979 1220 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM13AO94988 1023 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HEXIM1O94992 359 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR6B1O95007 311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 UPP2O95045 317 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 AGFG2O95081 481 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NXPH4O95158 308 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFB8O95169 186 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LETM1O95202 739 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IL18RAPO95256 599 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNH1O95259 989 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PDE8BO95263 885 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LYPD3O95274 346 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFA10O95299 355 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FKBP9O95302 570 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB7AO95365 584 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2C1O95371 312 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ARIH2O95376 493 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 WISP3O95389 354 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PGM3O95394 542 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GCNT3O95395 438 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RAPGEF3O95398 923 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GJB6O95452 261 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LARGE1O95461 756 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SGPL1O95470 568 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CLDN7O95471 211 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 VNN1O95497 513 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CLDN14O95500 239 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NPTXRO95502 500 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DUS4LO95620 317 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB11O95625 1053 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NTSR2O95665 410 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CRTAMO95727 393 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TBC1D8O95759 1140 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MLYCDO95822 493 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ABHD16AO95870 558 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TBX6O95947 436 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FTCDO95954 541 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 BMP15O95972 392 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NUDT3O95989 172 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLUD1P00367 558 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MT-CO3P00414 261 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ABL1P00519 1130 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 F2P00734 622 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RENP00797 406 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms