RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 Q9Y3F1 56 aa8.05□□□□□ -1.12
TRBV28-201ENST00000390400 SAR1BQ9Y6B6 198 aa8.05□□□□□ -1.12
TRBV28-201ENST00000390400 A0A1B0GVL5 298 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 A0A1W2PQC6 194 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 NDUFAB1O14561 156 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 DYNC1LI2O43237 492 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 ADCY6O43306 1168 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 MSCO60682 206 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 LUC7L3O95232 432 aaKnown RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SUPT20HL2P0C7V6 817 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CD68P34810 354 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 UBA7P41226 1012 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 PPP1R2P41236 205 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CCT5P48643 541 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 GRIK3Q13003 919 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 MORC3Q14149 939 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 RBBP5Q15291 538 aaKnown RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SLC10A6Q3KNW5 377 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CCDC40Q4G0X9 1142 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 ZNF569Q5MCW4 686 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SPDYCQ5MJ68 293 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 TMEM63BQ5T3F8 832 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CDKAL1Q5VV42 579 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 KRT79Q5XKE5 535 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 MIS18BP1Q6P0N0 1132 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 B3GNT9Q6UX72 402 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 LRIG3Q6UXM1 1119 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CCNI2Q6ZMN8 369 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 TOGARAM2Q6ZUX3 1019 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 ST13P5Q8NFI4 369 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 RASSF8Q8NHQ8 419 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 AFG1LQ8WV93 481 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SEPT1Q8WYJ6 367 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CCDC47Q96A33 483 aaKnown RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 GSDMAQ96QA5 445 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 GPR20Q99678 358 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 FAM126AQ9BYI3 521 aaPredicted RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 BCAS3Q9H6U6 928 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 SPC25Q9HBM1 224 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 INTS13Q9NVM9 706 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 DDX20Q9UHI6 824 aaKnown RBP8.04□□□□□ -1.12
TRBV28-201ENST00000390400 NFE2L3Q9Y4A8 694 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 PCDHA10Q9Y5I2 948 aa8.04□□□□□ -1.12
TRBV28-201ENST00000390400 CFAP73A6NFT4 308 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 PP2D1A8MPX8 630 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 TERTO14746 1132 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 SLC26A4O43511 780 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 SUSD5O60279 629 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 HSF2BPO75031 334 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 RTN2O75298 545 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 UBOX5O94941 541 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 IPO7O95373 1038 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 FAM107AO95990 144 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 MMP3P08254 477 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 PAEPP09466 180 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 ATP1A3P13637 1013 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CDC25AP30304 524 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CCT6AP40227 531 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 MASP1P48740 699 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CPT1AP50416 773 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 ADCY2Q08462 1091 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 XRCC4Q13426 336 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 POSTNQ15063 836 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 EPHA7Q15375 998 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 FSCN1Q16658 493 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 DGKDQ16760 1214 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 HSDL1Q3SXM5 330 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 SPECC1Q5M775 1068 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CROCCP2Q86T23 111 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CABP7Q86V35 215 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 MCATQ8IVS2 390 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 NEK9Q8TD19 979 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 ATP6V0A1Q93050 837 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 FAXDC2Q96IV6 333 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CDK5RAP3Q96JB5 506 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 OSBPL9Q96SU4 736 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 EIF2AK1Q9BQI3 630 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 NUP58Q9BVL2 599 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 SELENOOQ9BVL4 669 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 LGR4Q9BXB1 951 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CCSER1Q9C0I3 900 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 UPF3AQ9H1J1 476 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 AZI2Q9H6S1 392 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 MRPL44Q9H9J2 332 aaKnown RBP8.03□□□□□ -1.12
TRBV28-201ENST00000390400 TUFT1Q9NNX1 390 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 XPNPEP3Q9NQH7 507 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 FAM86C1Q9NVL1 165 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CRIM1Q9NZV1 1036 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 ADAM30Q9UKF2 790 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 CAPN7Q9Y6W3 813 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 KAT6AQ92794 2004 aa8.03□□□□□ -1.12
TRBV28-201ENST00000390400 FRMPD3Q5JV73 1810 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms