RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 RGS18Q9NS28 235 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 FAM49BQ9NUQ9 324 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 SLC38A7Q9NVC3 462 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 TMEM51Q9NW97 253 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 TJP2Q9UDY2 1190 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
SPTBN1-203ENST00000389980 C9IYK1 514 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 MICAL2O94851 1124 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 HSPA8P11142 646 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PNPLA4P41247 253 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 LBX1P52954 281 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 BFSP2Q13515 415 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 RPS6KA1Q15418 735 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TCTN1Q2MV58 587 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 SV2CQ496J9 727 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CTU1Q7Z7A3 348 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PHF13Q86YI8 300 aaPredicted RBP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CREG2Q8IUH2 290 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TMEM35BQ8NCS4 154 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 UBA3Q8TBC4 463 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 UBXN4Q92575 508 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 ABCB6Q9NP58 842 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 GDAP2Q9NXN4 497 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 A8MXQ7 604 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 M0QYV0 167 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 O00370 1275 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PODXLO00592 558 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 MED7O43513 233 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 KIF4AO95239 1232 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 VDRP11473 427 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 MMP8P22894 467 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 HADHBP55084 474 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CCL23P55773 120 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 SYCE1Q8N0S2 351 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 APPL2Q8NEU8 664 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PGBD4Q96DM1 585 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 PPP1R12CQ9BZL4 782 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 ALG6Q9Y672 507 aa12.94□□□□□ -0.34
SPTBN1-203ENST00000389980 CYB561D2O14569 222 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 KCNK3O14649 394 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 HUS1O60921 280 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 TCP1P17987 556 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 GNL1P36915 607 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 RNASE9P60153 205 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 TLE2Q04725 743 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 TCEAL1Q15170 157 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 OSTM1Q86WC4 334 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 UVRAGQ9P2Y5 699 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 TSPAN16Q9UKR8 245 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 TIMM13Q9Y5L4 95 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 F8W810 466 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 I3L4J1 428 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 MTA2O94776 668 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 PRLRP16471 622 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 COMTP21964 271 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 FAAP100Q0VG06 881 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 CLLU1OSQ5K130 101 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 LIN9Q5TKA1 542 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 WSCD1Q658N2 575 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 ADGRF2Q8IZF7 708 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 CEP112Q8N8E3 955 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 AVENQ9NQS1 362 aaPredicted RBP12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
SPTBN1-203ENST00000389980 PIK3R2O00459 728 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 B4GALT3O60512 393 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 MYBL1P10243 752 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 SKIP12755 728 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 ACAT1P24752 427 aaKnown RBP12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 CYP2C18P33260 490 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 CNGA2Q16280 664 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 UPP1Q16831 310 aa12.92□□□□□ -0.34
SPTBN1-203ENST00000389980 GOLGA7BQ2TAP0 167 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms