RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 POTEAQ6S8J7 498 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 CEP128Q6ZU80 1094 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 LRRC71Q8N4P6 559 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 MAB21L3Q8N8X9 362 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 PORCNQ9H237 461 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 AVENQ9NQS1 362 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 WHRNQ9P202 907 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ATXN2Q99700 1313 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 TCP11X1B4DZS4 312 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 SMNDC1O75940 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 PTK6Q13882 451 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 CAPSQ13938 189 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 MIPOL1Q8TD10 442 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 SNRNP27Q8WVK2 155 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 AS3MTQ9HBK9 375 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 FESP07332 822 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 GBP1P32455 592 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 MYL6P60660 151 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 P3H1Q32P28 736 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 MFSD7Q6UXD7 560 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 CATSPERGQ6ZRH7 1159 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF606Q8WXB4 792 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 PCYT2Q99447 389 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 SAE1Q9UBE0 346 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 TJP2Q9UDY2 1190 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DNPEPQ9ULA0 475 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZC3H11AO75152 810 aaKnown RBP eCLIP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 TTC4O95801 387 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 ITIH2P19823 946 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 UBA1P22314 1058 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DYNLT1P63172 113 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 IGBP1P78318 339 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 OGDHQ02218 1023 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DEUP1Q05D60 604 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 STXBP2Q15833 593 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 TREML2Q5T2D2 321 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 XRRA1Q6P2D8 792 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 CCT6BQ92526 530 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 DHX33Q9H6R0 707 aaKnown RBP12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 GALNT8Q9NY28 637 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 IVNS1ABPQ9Y6Y0 642 aa12.35□□□□□ -0.43
RAPGEF3-201ENST00000389212 CNTNAP2Q9UHC6 1331 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 A0A0B4J269 797 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 DPPA5A6NC42 116 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 GOLGA8SH3BPF8 625 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 BANF1O75531 89 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 KRT1P04264 644 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 DESP17661 470 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 BPIFB4P59827 614 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 LY6KQ17RY6 165 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 TRMT10CQ7L0Y3 403 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 TRAPPC12Q8WVT3 735 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 CORO1CQ9ULV4 474 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 IFNB1P01574 187 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 LINGO3P0C6S8 592 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 SLC1A1P43005 524 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 RTP1P59025 263 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 TFAMQ00059 246 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF252P-AS1Q0IIN9 211 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 PTP4A2Q12974 167 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 THNSL1Q8IYQ7 743 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 CENPTQ96BT3 561 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 SAMD15Q9P1V8 674 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF148Q9UQR1 794 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 MAFBQ9Y5Q3 323 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 NFASCO94856 1347 aa12.34□□□□□ -0.43
RAPGEF3-201ENST00000389212 BRAFP15056 766 aa12.33□□□□□ -0.44
RAPGEF3-201ENST00000389212 ARL2P36404 184 aa12.33□□□□□ -0.44
RAPGEF3-201ENST00000389212 NAMPTP43490 491 aa12.33□□□□□ -0.44
RAPGEF3-201ENST00000389212 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms