RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CREB5Q02930 508 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 PPP2R3AQ06190 1150 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 FBXO43Q4G163 708 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 SEPT5Q99719 369 aaPredicted RBP23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 LPIN3Q9BQK8 851 aa23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 SMG9Q9H0W8 520 aaKnown RBP23.18■■□□□ 1.3
CNEP1R1-201ENST00000389134 BCLAF3A2AJT9 711 aaKnown RBP23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 SFI1A8K8P3 1242 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 GIPC1O14908 333 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 EGFP01133 1207 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 TRAPPC10P48553 1259 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 LILRA4P59901 499 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 ZNF252P-AS1Q0IIN9 211 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 FOXC1Q12948 553 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 TAF12Q16514 161 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 KYAT1Q16773 422 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 MGAT5BQ3V5L5 792 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 IGSF22Q8N9C0 903 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 TMEM161BQ8NDZ6 487 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 HHIPQ96QV1 700 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 EBF3Q9H4W6 596 aa23.17■■□□□ 1.3
CNEP1R1-201ENST00000389134 MAPTP10636 758 aaKnown RBP23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 GUCY2CP25092 1073 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 AVPR1AP37288 418 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 KRT79Q5XKE5 535 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 SYT13Q7L8C5 426 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 CHFRQ96EP1 664 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 SENP8Q96LD8 212 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 EBF1Q9UH73 591 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 WASF3Q9UPY6 502 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 CACNA1EQ15878 2313 aa23.16■■□□□ 1.3
CNEP1R1-201ENST00000389134 WDFY3Q8IZQ1 3526 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 OTOL1A6NHN0 477 aaPredicted RBP23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 LACTBL1A8MY62 500 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 APBB3O95704 486 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 PLS3P13797 630 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 ATF6P18850 670 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 DDX6P26196 483 aaKnown RBP eCLIP23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 GALK1P51570 392 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 GUCY2FP51841 1108 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 BFSP1Q12934 665 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 SLC39A12Q504Y0 691 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 SH3PXD2AQ5TCZ1 1133 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 TRIM68Q6AZZ1 485 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 C2orf15Q8WU43 125 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 HAPLN2Q9GZV7 340 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 KIF9Q9HAQ2 790 aa23.15■■□□□ 1.3
CNEP1R1-201ENST00000389134 SOBPA7XYQ1 873 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 CYP11A1P05108 521 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 CEACAM1P13688 526 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 SMARCB1Q12824 385 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 SPATA1Q5VX52 437 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 CC2D1AQ6P1N0 951 aaPredicted RBP23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 OR10T2Q8NGX3 314 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 RPLP0P6Q8NHW5 317 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 USP13Q92995 863 aaPredicted RBP23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 P2RY13Q9BPV8 354 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 ADAM33Q9BZ11 813 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 ZCWPW1Q9H0M4 648 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 FBRSL1Q9HCM7 1045 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 TDP1Q9NUW8 608 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 POLR3BQ9NW08 1133 aaPredicted RBP23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 DSEQ9UL01 958 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 CCL26Q9Y258 94 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 PTPRDP23468 1912 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 ANAPC1Q9H1A4 1944 aa23.14■■□□□ 1.29
CNEP1R1-201ENST00000389134 LNP1A1A4G5 178 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 H0YCG3 227 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 DCLK1O15075 740 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 CSRP1P21291 193 aaKnown RBP23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 TNFSF9P41273 254 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 ACAP1Q15027 740 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 PDGFRLQ15198 375 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 C11orf74Q86VG3 221 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 MAB21L3Q8N8X9 362 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 GIPC2Q8TF65 315 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 ACDQ96AP0 544 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 BICD1Q96G01 975 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 TMEM121BQ9BXQ6 578 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 RPF1Q9H9Y2 349 aaKnown RBP23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 TBX20Q9UMR3 447 aa23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 MYO18AQ92614 2054 aaKnown RBP23.13■■□□□ 1.29
CNEP1R1-201ENST00000389134 PPEF2O14830 753 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 KHNYNO15037 678 aaKnown RBP23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 ADRB2P07550 413 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 DMC1Q14565 340 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 ENOX2Q16206 610 aaKnown RBP23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 CD302Q8IX05 232 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 NBEAQ8NFP9 2946 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 SPPL2BQ8TCT7 592 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 TMEM9BQ9NQ34 198 aa23.12■■□□□ 1.29
CNEP1R1-201ENST00000389134 F11P03951 625 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 HAPLN1P10915 354 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 HOXB3P14651 431 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 ARSAP15289 507 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 GBP1P32455 592 aa23.11■■□□□ 1.29
CNEP1R1-201ENST00000389134 GJA4P35212 333 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms