RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 RPL17P18621 184 aaKnown RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 TGM1P22735 817 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 CD6P30203 668 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 GCLCP48506 637 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 TCF15Q12870 199 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 POLD3Q15054 466 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 CD300EQ496F6 205 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 RNF220Q5VTB9 566 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 SFRP4Q6FHJ7 346 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 MRGPRGQ86SM5 289 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 GPR149Q86SP6 731 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 FAM156AQ8NDB6 213 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 POC1BQ8TC44 478 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 FUBP1Q96AE4 644 aaKnown RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 NACC2Q96BF6 587 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 MRGPRX1Q96LB2 322 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 NELL2Q99435 816 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 AIFM2Q9BRQ8 373 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 TTPALQ9BTX7 342 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 TRIM54Q9BYV2 358 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 KIAA1586Q9HCI6 787 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 CTTNBP2NLQ9P2B4 639 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 DDX20Q9UHI6 824 aaKnown RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 OGDHLQ9ULD0 1010 aa4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 WDR33Q9C0J8 1336 aaKnown RBP4.11□□□□□ -1.75
RNU6-39P-201ENST00000384344 CCDC78A2IDD5 438 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 BTN3A1O00481 513 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SRGNP10124 158 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 RHCEP18577 417 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 EN2P19622 333 aaPredicted RBP4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 CHRM3P20309 590 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 PEX2P28328 305 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 VIPR2P41587 438 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 LOXL3P58215 753 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 MC2RQ01718 297 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 RHDQ02161 417 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 ITIH3Q06033 890 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 DPTQ07507 201 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC13A2Q13183 592 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 MPP3Q13368 585 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 TEDDM1Q5T9Z0 273 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 HECTD2Q5U5R9 776 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 TAF2Q6P1X5 1199 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 PPP1R32Q7Z5V6 425 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 VRK3Q8IV63 474 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 FAM9AQ8IZU1 332 aaPredicted RBP4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 MPP5Q8N3R9 675 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 LNX2Q8N448 690 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC44A3Q8N4M1 653 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 Q8NA96 180 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 TOR1AIP2Q8NFQ8 470 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 IL31RAQ8NI17 732 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SSH3Q8TE77 659 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 ASB10Q8WXI3 467 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 PGBD1Q96JS3 809 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 Q96MF0 132 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC46A1Q96NT5 459 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 NT5C1BQ96P26 610 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 OSBPL9Q96SU4 736 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 P2RX7Q99572 595 aaKnown RBP4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 SPATA5L1Q9BVQ7 753 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 TPSD1Q9BZJ3 242 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 TTYH3Q9C0H2 523 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 NUP62CLQ9H1M0 184 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 ZNF287Q9HBT7 754 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 KCTD5Q9NXV2 234 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 ETAA1Q9NY74 926 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 LRIT1Q9P2V4 623 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 XPR1Q9UBH6 696 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 HESX1Q9UBX0 185 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 PACSIN3Q9UKS6 424 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 AGAP1Q9UPQ3 857 aa4.1□□□□□ -1.75
RNU6-39P-201ENST00000384344 CCDC151A5D8V7 595 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 FOXN3O00409 490 aaPredicted RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 YY2O15391 372 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 PRC1O43663 620 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 CAND2O75155 1236 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 DNAJB5O75953 348 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 ESRRBO95718 433 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 MAP4K4O95819 1239 aaPredicted RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 GCP02774 474 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 KRT18P05783 430 aaKnown RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 LRPAP1P30533 357 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 PXNP49023 591 aaPredicted RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 SLC11A2P49281 568 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 WNT3P56703 355 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 NXPH1P58417 271 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 MRPS35P82673 323 aaKnown RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 KRT17Q04695 432 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 FSTL1Q12841 308 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 KLF10Q13118 480 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 SF3B3Q15393 1217 aaKnown RBP4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 NBPF8Q3BBV2 869 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 APOA5Q6Q788 366 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 Q6YL49 198 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 Q6ZNX1 250 aa4.09□□□□□ -1.75
RNU6-39P-201ENST00000384344 CELF5Q8N6W0 485 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms