RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SOBPA7XYQ1 873 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 CHURC1-FNTBB4DL54 471 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 PRAMEF12O95522 483 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 HAPLN1P10915 354 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 FNTBP49356 437 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 GRIN1Q05586 938 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 SPEM2Q0P670 501 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 CCINQ13939 588 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 TAF12Q16514 161 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 ITPRIPL2Q3MIP1 535 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 SV2CQ496J9 727 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 WDR44Q5JSH3 913 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 PRR23BQ6ZRT6 265 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 ZNF720Q7Z2F6 126 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 GPIHBP1Q8IV16 184 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 ZFYVE19Q96K21 471 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 TCHHQ07283 1943 aa19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 KIF26AQ9ULI4 1882 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-201ENST00000383820 KPNA7A9QM74 516 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 TISP43B9A030 160 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 HRO43593 1189 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 FOXD2O60548 495 aaPredicted RBP19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 IL18RAPO95256 599 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 CD2BP2O95400 341 aaKnown RBP19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 DDX6P26196 483 aaKnown RBP eCLIP19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 PNPLA4P41247 253 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 CYP4F8P98187 520 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 PON2Q15165 354 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 LPAL2Q16609 132 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 WSCD1Q658N2 575 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 CRELD2Q6UXH1 353 aaPredicted RBP19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 Q6ZS52 159 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 NETO1Q8TDF5 533 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 ZNF560Q96MR9 790 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 SEL1LQ9UBV2 794 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 STK17AQ9UEE5 414 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 NCOR2Q9Y618 2525 aa19.3■□□□□ 0.68
RPUSD3-201ENST00000383820 PPP1R37O75864 691 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 DMWDQ09019 674 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 LRRTM3Q86VH5 581 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 EFCAB13Q8IY85 973 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 CMTM8Q8IZV2 173 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 POMGNT1Q8WZA1 660 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 SLC46A2Q9BY10 475 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 PCDHB5Q9Y5E4 795 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 DENND4CQ5VZ89 1909 aa19.29■□□□□ 0.68
RPUSD3-201ENST00000383820 F11P03951 625 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 ADSSP30520 456 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 TSPY1Q01534 308 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 TNK2Q07912 1038 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 CSRP2Q16527 193 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 NFE2Q16621 373 aaPredicted RBP19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 WDR5BQ86VZ2 330 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 TTC8Q8TAM2 541 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 GIPC2Q8TF65 315 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 FAM83CQ9BQN1 747 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 KIF9Q9HAQ2 790 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 UPF2Q9HAU5 1272 aaKnown RBP19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 SEMA4GQ9NTN9 838 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 ABI2Q9NYB9 513 aaPredicted RBP19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 CCDC39Q9UFE4 941 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 EXOC7Q9UPT5 735 aa19.28■□□□□ 0.68
RPUSD3-201ENST00000383820 SLC30A4O14863 429 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 CSH1P0DML2 217 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 CSH2P0DML3 217 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 HMGA1P17096 107 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 GAP43P17677 238 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 AVPR1AP37288 418 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 NLRP12P59046 1061 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 DYMQ7RTS9 669 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 TMEM150AQ86TG1 271 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 EPSTI1Q96J88 318 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 GKN1Q9NS71 199 aa19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-201ENST00000383820 CCDC163A0A0D9SF12 145 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 DCDC2BA2VCK2 349 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 LDHAP00338 332 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 AMPD2Q01433 879 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 RUNX3Q13761 415 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 TMEM196Q5HYL7 178 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 HEATR6Q6AI08 1181 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 PRR23CQ6ZRP0 262 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 CEP68Q76N32 757 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 BRSK2Q8IWQ3 736 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 SPATA18Q8TC71 538 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 MRPS31Q92665 395 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 ACBD6Q9BR61 282 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 MRPL44Q9H9J2 332 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 TDP1Q9NUW8 608 aa19.26■□□□□ 0.67
RPUSD3-201ENST00000383820 TRDMT1O14717 391 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 ATG13O75143 517 aa19.25■□□□□ 0.67
RPUSD3-201ENST00000383820 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms