RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 UTRNP46939 3433 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 DUSP11O75319 330 aaKnown RBP17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 NPTXRO95502 500 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 RPLP2P05387 115 aaKnown RBP17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 AKR1A1P14550 325 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 CD19P15391 556 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 CRYBB1P53674 252 aaPredicted RBP17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 TAS2R40P59535 323 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 SGO2Q562F6 1265 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 EMC10Q5UCC4 262 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 TMC3Q7Z5M5 1100 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 BEST2Q8NFU1 509 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 C18orf8Q96DM3 657 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 FMO2Q99518 471 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 TRIM51Q9BSJ1 452 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 NEUROG2Q9H2A3 272 aa17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
LOH12CR2-201ENST00000381800 TCRBV7S2A1N4TA0A589 114 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM170AA1A519 330 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 A6NNZ2 444 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 O00370 1275 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ECEL1O95672 775 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 SETSIPP0DME0 302 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TM4SF4P48230 202 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 SNX17Q15036 470 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CCNG2Q16589 344 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TUBB8Q3ZCM7 444 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 PTPN20Q4JDL3 420 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 LLGL2Q6P1M3 1020 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TAF2Q6P1X5 1199 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 DRICH1Q6PGQ1 229 aaPredicted RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 DCUN1D2Q6PH85 259 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 LCLAT1Q6UWP7 414 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 DDX42Q86XP3 938 aaKnown RBP eCLIP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 MCRS1Q96EZ8 462 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 DCLK3Q9C098 648 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 EFR3BQ9Y2G0 817 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM155AB1AL88 458 aaPredicted RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CD4P01730 458 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 KCNE1P15382 129 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CYP2B6P20813 491 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CYP3A5P20815 502 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 HSD17B3P37058 310 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CDH8P55286 799 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 RPL7AP62424 266 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZNF252P-AS1Q0IIN9 211 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CCL14Q16627 93 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 FSCN1Q16658 493 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 C2CD6Q53TS8 623 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZDHHC24Q6UX98 284 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 UNC93AQ86WB7 457 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 CCDC105Q8IYK2 499 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 TWNKQ96RR1 684 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 NT5C1AQ9BXI3 368 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 OSBPL8Q9BZF1 889 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 PLEKHA4Q9H4M7 779 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 GRHL1Q9NZI5 618 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 WHRNQ9P202 907 aa17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 MTRF1LQ9UGC7 380 aaKnown RBP17.11■□□□□ 0.33
LOH12CR2-201ENST00000381800 GOLGA6CA6NDK9 693 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 H0YGN5 161 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 CA12O43570 354 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 MICAL2O94851 1124 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 MYL3P08590 195 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM163BP0C2L3 166 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 GOLGA6DP0CG33 693 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 GPD2P43304 727 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 GJA9P57773 515 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 PTK6Q13882 451 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 UAP1Q16222 522 aaPredicted RBP17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 ATL2Q8NHH9 583 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 FAM76AQ8TAV0 307 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 MCEEQ96PE7 176 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 OSMRQ99650 979 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 TSPYL1Q9H0U9 437 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 DPH5Q9H2P9 285 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 CDHR5Q9HBB8 845 aa17.1■□□□□ 0.33
LOH12CR2-201ENST00000381800 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms