RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 EFTUD2Q15029 972 aaKnown RBP eCLIP14.59□□□□□ -0.078e-9■■■■■ 27
SDC1-202ENST00000381150 PLEKHG4Q58EX7 1191 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 POTEAQ6S8J7 498 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 TMEM174Q8WUU8 243 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 CFAP57Q96MR6 1250 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 SLC38A10Q9HBR0 1119 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 USP20Q9Y2K6 914 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
SDC1-202ENST00000381150 MAPK6Q16659 721 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 TKFCQ3LXA3 575 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 TRIM74Q86UV6 250 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 TRIM73Q86UV7 250 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 DRAXINQ8NBI3 349 aaPredicted RBP14.59□□□□□ -0.07
SDC1-202ENST00000381150 ATL2Q8NHH9 583 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 BTBD10Q9BSF8 475 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 TRIM55Q9BYV6 548 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 AGO4Q9HCK5 861 aaKnown RBP14.59□□□□□ -0.07
SDC1-202ENST00000381150 LMCD1Q9NZU5 365 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 SH3BP1Q9Y3L3 701 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 ZHX2Q9Y6X8 837 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 PARP14Q460N5 1801 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 WDR46O15213 610 aaKnown RBP14.58□□□□□ -0.07
SDC1-202ENST00000381150 CCNG1P51959 295 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 PPP3CAQ08209 521 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 TMEM63BQ5T3F8 832 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 C1orf146Q5VVC0 180 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 C11orf63Q6NUN7 778 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 GLIS1Q8NBF1 620 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 LMO3Q8TAP4 145 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 GRK7Q8WTQ7 553 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 SNRNP27Q8WVK2 155 aaKnown RBP14.58□□□□□ -0.07
SDC1-202ENST00000381150 RILPQ96NA2 401 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 TUBGCP5Q96RT8 1024 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 CLIC5Q9NZA1 410 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 PPARGC1AQ9UBK2 798 aaKnown RBP14.58□□□□□ -0.07
SDC1-202ENST00000381150 NUMBLQ9Y6R0 609 aa14.58□□□□□ -0.07
SDC1-202ENST00000381150 GSC2O15499 205 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 GGPS1O95749 300 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 P4HBP07237 508 aaKnown RBP14.58□□□□□ -0.08
SDC1-202ENST00000381150 IRX4P78413 519 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 TNFAIP8L3Q5GJ75 292 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 C6orf163Q5TEZ5 329 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 PADI6Q6TGC4 694 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 RINLQ6ZS11 566 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 TRABD2AQ86V40 505 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 CCDC89Q8N998 374 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 SYTL5Q8TDW5 730 aaPredicted RBP14.58□□□□□ -0.08
SDC1-202ENST00000381150 LPAR1Q92633 364 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 ZNF184Q99676 751 aaPredicted RBP14.58□□□□□ -0.08
SDC1-202ENST00000381150 CBWD1Q9BRT8 395 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 PI4K2AQ9BTU6 479 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 VCX3BQ9H321 246 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 VCX3AQ9NNX9 186 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 A6NJR5 290 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 E7ENQ6 273 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 FGFR1P11362 822 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 MXI1P50539 228 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 ARSEP51690 589 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 KBTBD2Q8IY47 623 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 C10orf82Q8WW14 230 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 DNAJC1Q96KC8 554 aaKnown RBP14.58□□□□□ -0.08
SDC1-202ENST00000381150 FHDC1Q9C0D6 1143 aaPredicted RBP14.58□□□□□ -0.08
SDC1-202ENST00000381150 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 ASB3Q9Y575 518 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 SLC4A7Q9Y6M7 1214 aa14.58□□□□□ -0.08
SDC1-202ENST00000381150 SSTR1P30872 391 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 ZNF280AP59817 542 aaPredicted RBP14.57□□□□□ -0.08
SDC1-202ENST00000381150 ATP13A4Q4VNC1 1196 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 MIER3Q7Z3K6 550 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 OPTNQ96CV9 577 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 NSL1Q96IY1 281 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 FNBP1Q96RU3 617 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 MAK16Q9BXY0 300 aaKnown RBP14.57□□□□□ -0.08
SDC1-202ENST00000381150 SYNCQ9H7C4 482 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 PREBQ9HCU5 417 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 CHMP2BQ9UQN3 213 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 HNRNPRO43390 633 aaKnown RBP14.57□□□□□ -0.08
SDC1-202ENST00000381150 CIB2O75838 187 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 LYPLA2O95372 231 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 RARRES1P49788 294 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 EPHB1P54762 984 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 NR1H3Q13133 447 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 DYNC1I2Q13409 638 aaKnown RBP14.57□□□□□ -0.08
SDC1-202ENST00000381150 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 MYBPC2Q14324 1141 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 TCP10LQ8TDR4 215 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 ANKRD27Q96NW4 1050 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 TAAR1Q96RJ0 339 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 RAVER2Q9HCJ3 691 aaKnown RBP14.57□□□□□ -0.08
SDC1-202ENST00000381150 SLC17A7Q9P2U7 560 aa14.57□□□□□ -0.08
SDC1-202ENST00000381150 SGK1O00141 431 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 LYNP07948 512 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 VAMP7P51809 220 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 RTP1P59025 263 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 MOGSQ13724 837 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 SIX1Q15475 284 aaPredicted RBP14.56□□□□□ -0.08
SDC1-202ENST00000381150 PDK4Q16654 411 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 SLC5A9Q2M3M2 681 aa14.56□□□□□ -0.08
SDC1-202ENST00000381150 CIAPIN1Q6FI81 312 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms