RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 PPP2R2CQ9Y2T4 447 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 INSL6Q9Y581 213 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 SF3B1O75533 1304 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSSC4-203ENST00000380996 F8W810 466 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 I3L4J1 428 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 PDGFRBP09619 1106 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 LAG3P18627 525 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 PCSK1P29120 753 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 HTRA4P83105 476 aaPredicted RBP21.75■■□□□ 1.07
TSSC4-203ENST00000380996 SGO2Q562F6 1265 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 CCDC122Q5T0U0 273 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 ACRBPQ8NEB7 543 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 LNX1Q8TBB1 728 aaPredicted RBP21.75■■□□□ 1.07
TSSC4-203ENST00000380996 DDX43Q9NXZ2 648 aaKnown RBP21.75■■□□□ 1.07
TSSC4-203ENST00000380996 HCSTQ9UBK5 93 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 NAGPAQ9UK23 515 aa21.75■■□□□ 1.07
TSSC4-203ENST00000380996 TIMM13Q9Y5L4 95 aaPredicted RBP21.75■■□□□ 1.07
TSSC4-203ENST00000380996 SYN3O14994 580 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 CALCAP01258 141 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
TSSC4-203ENST00000380996 BRD2P25440 801 aaKnown RBP21.74■■□□□ 1.07
TSSC4-203ENST00000380996 MAGEA1P43355 309 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 CYP27A1Q02318 531 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 ORC1Q13415 861 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 ACOT1Q86TX2 421 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 OSTM1Q86WC4 334 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 HERC6Q8IVU3 1022 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 THEM5Q8N1Q8 247 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 ZNF558Q96NG5 402 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 KCND1Q9NSA2 647 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 MARCH5Q9NX47 278 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 PCDHA13Q9Y5I0 950 aa21.74■■□□□ 1.07
TSSC4-203ENST00000380996 ZNF263O14978 683 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 GZMAP12544 262 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 LMO2P25791 158 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 CNGA2Q16280 664 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 OVOS1Q6IE37 1185 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 PPP1R2P3Q6NXS1 205 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 KCNT2Q6UVM3 1135 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 KIAA1328Q86T90 577 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 CCAR2Q8N163 923 aaKnown RBP21.73■■□□□ 1.07
TSSC4-203ENST00000380996 TFAP2BQ92481 460 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 RAD9AQ99638 391 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 AAASQ9NRG9 546 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 PCDHGC3Q9UN70 934 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 CEP83Q9Y592 693 aa21.73■■□□□ 1.07
TSSC4-203ENST00000380996 NT5C1B-RDH14C9J2C7 533 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 YWHAHQ04917 246 aaPredicted RBP21.72■■□□□ 1.07
TSSC4-203ENST00000380996 FUT10Q6P4F1 479 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 FIBCD1Q8N539 461 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 OLIG1Q8TAK6 271 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 PCDHB18PQ96TA0 734 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 CDH9Q9ULB4 789 aa21.72■■□□□ 1.07
TSSC4-203ENST00000380996 REXO2Q9Y3B8 237 aaKnown RBP21.72■■□□□ 1.07
TSSC4-203ENST00000380996 MRPL42Q9Y6G3 142 aaKnown RBP21.72■■□□□ 1.07
TSSC4-203ENST00000380996 FNDC1Q4ZHG4 1894 aaPredicted RBP21.72■■□□□ 1.07
TSSC4-203ENST00000380996 GOLGA6L9A6NEM1 432 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 ESPNB1AK53 854 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 LSM8O95777 96 aaKnown RBP21.71■■□□□ 1.07
TSSC4-203ENST00000380996 MAGEA10P43363 369 aaPredicted RBP21.71■■□□□ 1.07
TSSC4-203ENST00000380996 VAV2P52735 878 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 CLEC16AQ2KHT3 1053 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 RASIP1Q5U651 963 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 FAM171A1Q5VUB5 890 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 B3GALNT2Q8NCR0 500 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 IGSF21Q96ID5 467 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 ACBD6Q9BR61 282 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 ZNF518BQ9C0D4 1074 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 DPEP3Q9H4B8 488 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 NENFQ9UMX5 172 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 NME7Q9Y5B8 376 aa21.71■■□□□ 1.07
TSSC4-203ENST00000380996 O00370 1275 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 TLL1O43897 1013 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 RTN2O75298 545 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 CYP1A1P04798 512 aaPredicted RBP21.7■■□□□ 1.07
TSSC4-203ENST00000380996 PTPN1P18031 435 aaKnown RBP21.7■■□□□ 1.07
TSSC4-203ENST00000380996 PBX3P40426 434 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 ARHGAP17Q68EM7 881 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.7■■□□□ 1.07
TSSC4-203ENST00000380996 COLGALT1Q8NBJ5 622 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 TMEM35BQ8NCS4 154 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 SYT15Q9BQS2 421 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 ZSWIM1Q9BR11 485 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 GPR62Q9BZJ7 368 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 LHX5Q9H2C1 402 aa21.7■■□□□ 1.07
TSSC4-203ENST00000380996 TRMT1Q9NXH9 659 aaKnown RBP21.7■■□□□ 1.07
TSSC4-203ENST00000380996 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.7■■□□□ 1.07
TSSC4-203ENST00000380996 ATP8B3O60423 1300 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 OAZ2O95190 189 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 H2AFZP0C0S5 128 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 TKTP29401 623 aaKnown RBP21.7■■□□□ 1.06
TSSC4-203ENST00000380996 PPM1AP35813 382 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 LCLAT1Q6UWP7 414 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 H2AFVQ71UI9 128 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 PALB2Q86YC2 1186 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 C12orf29Q8N999 325 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 CYFIP2Q96F07 1278 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 TMEM169Q96HH4 297 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 TSGA10Q9BZW7 698 aa21.7■■□□□ 1.06
TSSC4-203ENST00000380996 ISCUQ9H1K1 167 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms