RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 NOP14P78316 857 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 IL9RQ01113 521 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 STAT4Q14765 748 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 EFTUD2Q15029 972 aaKnown RBP eCLIP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 SLC1A5Q15758 541 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 XRRA1Q6P2D8 792 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 THNSL1Q8IYQ7 743 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 RDM1Q8NG50 284 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 MAIP1Q8WWC4 291 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 VPS37BQ9H9H4 285 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 ZNF148Q9UQR1 794 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 CEP83Q9Y592 693 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 A0A1B0GUA9 196 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 SOWAHBA6NEL2 793 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 KRT15P19012 456 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 ARSEP51690 589 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 SNRPFP62306 86 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 GPS1Q13098 491 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 MFSD7Q6UXD7 560 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 PPP1R21Q6ZMI0 780 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 ANKMY2Q8IV38 441 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 DCPSQ96C86 337 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 NLRP4Q96MN2 994 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 NTPCRQ9BSD7 190 aaKnown RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 SAE1Q9UBE0 346 aaPredicted RBP17.16■□□□□ 0.34
NKX3-1-201ENST00000380871 UPP2O95045 317 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 CBX6O95503 412 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ACO1P21399 889 aaKnown RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 GJC2Q5T442 439 aaPredicted RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 C15orf39Q6ZRI6 1047 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 BZW1Q7L1Q6 419 aaKnown RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 VSIG1Q86XK7 387 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ARHGAP28Q9P2N2 729 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ZMYND8Q9ULU4 1186 aaPredicted RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 NUMBLQ9Y6R0 609 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 LIASO43766 372 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 EXTL3O43909 919 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 CCND1P24385 295 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 GNA15P30679 374 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 KATNAL2Q8IYT4 538 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ZBED8Q8IZ13 594 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 CCHCR1Q8TD31 782 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ZNF408Q9H9D4 720 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 PSTPIP1O43586 416 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 GM2AP17900 193 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 CRYMQ14894 314 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 ADAMTS5Q9UNA0 930 aa17.15■□□□□ 0.34
NKX3-1-201ENST00000380871 PSME4Q14997 1843 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 F8VP50 259 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 IFNB1P01574 187 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 OAZ1P54368 228 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 LACTBP83111 547 aaPredicted RBP17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ZNF252P-AS1Q0IIN9 211 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ANKRD20A2Q5SQ80 823 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ANKRD20A1Q5TYW2 823 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ANKRD20A3Q5VUR7 823 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 EP400NLQ6ZTU2 488 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 DENND1AQ8TEH3 1009 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 FAM167BQ9BTA0 163 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 SPATC1LQ9H0A9 340 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 WDR91A4D1P6 747 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 MYBL1P10243 752 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 CA4P22748 312 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 GTF2H1P32780 548 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 MCCD1P59942 119 aaPredicted RBP17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 PTP4A2Q12974 167 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 HSDL1Q3SXM5 330 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ZACNQ401N2 412 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 PPP1R13LQ8WUF5 828 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 FAXDC2Q96IV6 333 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 FAM81BQ96LP2 452 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 PCYT2Q99447 389 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 SLC24A3Q9HC58 644 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 PDLIM7Q9NR12 457 aa17.14■□□□□ 0.33
NKX3-1-201ENST00000380871 ARIH2O95376 493 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 KRT1P04264 644 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 MOGSQ13724 837 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 FBXO16Q8IX29 292 aaPredicted RBP17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 SENP7Q9BQF6 1050 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 NRBP2Q9NSY0 501 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
NKX3-1-201ENST00000380871 DNALI1O14645 258 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms