RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MRPL58Q14197 206 aaKnown RBP9.94□□□□□ -0.82
HMGN1-202ENST00000380747 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CAMK4Q16566 473 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 LIN9Q5TKA1 542 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 SCARA3Q6AZY7 606 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 OVOS1Q6IE37 1185 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 SLC8B1Q6J4K2 584 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CLEC17AQ6ZS10 378 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 TRAPPC11Q7Z392 1133 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 METTL23Q86XA0 190 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 LRRC52Q8N7C0 313 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 HDAC7Q8WUI4 952 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 RIPOR3Q96MK2 946 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 TSG101Q99816 390 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PLEKHA4Q9H4M7 779 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 SIX4Q9UIU6 781 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 FBXW11Q9UKB1 542 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 OR6C75A6NL08 312 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 LRRIQ3A6PVS8 624 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-202ENST00000380747 PRRG1O14668 218 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 HUS1O60921 280 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 RFPL2O75678 378 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 AP1G2O75843 785 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 OAZ2O95190 189 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 C1RP00736 705 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ELF1P32519 619 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 MTHFRP42898 656 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ROR1Q01973 937 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 MYO1EQ12965 1108 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 BIRC3Q13489 604 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 TRPC3Q13507 836 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 STIM1Q13586 685 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 NFIL3Q16649 462 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ZCWPW2Q504Y3 356 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 KLHL10Q6JEL2 608 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ERMP1Q7Z2K6 904 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 GPR149Q86SP6 731 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 FAM186BQ8IYM0 893 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 CMASQ8NFW8 434 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-202ENST00000380747 FEZF2Q8TBJ5 459 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ATOH1Q92858 354 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-202ENST00000380747 EEF2KMTQ96G04 330 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 BORCS6Q96GS4 357 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 HPDLQ96IR7 371 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 PIDD1Q9HB75 910 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 ZDHHC7Q9NXF8 308 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 DSEQ9UL01 958 aa9.93□□□□□ -0.82
HMGN1-202ENST00000380747 EPG5Q9HCE0 2579 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 WDR27A2RRH5 827 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 GOLGA6L22H0YM25 854 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 PSMA7O14818 248 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CETN3O15182 167 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 TBC1D4O60343 1298 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 AKAP3O75969 853 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CYP11A1P05108 521 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 C8AP07357 584 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 KRT13P13646 458 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 SP100P23497 879 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 PSMC2P35998 433 aaKnown RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 NBL1P41271 181 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 AP3M2P53677 418 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 DLG4P78352 724 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 MORC3Q14149 939 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 COBLL1Q53SF7 1204 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 WSCD1Q658N2 575 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 ANKRD40Q6AI12 368 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CENPPQ6IPU0 288 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CCDC149Q6ZUS6 474 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 THEM5Q8N1Q8 247 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF461Q8TAF7 563 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CXorf38Q8TB03 319 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 SLC7A14Q8TBB6 771 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 PARD3BQ8TEW8 1205 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 TMEM174Q8WUU8 243 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 SMG7Q92540 1137 aaKnown RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 NECTIN4Q96NY8 510 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 PGLYRP2Q96PD5 576 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 GZF1Q9H116 711 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 POMKQ9H5K3 350 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 MMRN2Q9H8L6 949 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 CYP4F11Q9HBI6 524 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 LMBRD1Q9NUN5 540 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 FAM86C1Q9NVL1 165 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 TSR3Q9UJK0 312 aaKnown RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 L1RE1Q9UN81 338 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 POLIQ9UNA4 740 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 SNX9Q9Y5X1 595 aa9.92□□□□□ -0.82
HMGN1-202ENST00000380747 EP300Q09472 2414 aaPredicted RBP9.92□□□□□ -0.82
HMGN1-202ENST00000380747 ANK1P16157 1881 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms