RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PRLRP16471 622 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 SERPINB10P48595 397 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 TRIP10Q15642 601 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 GOLGA7BQ2TAP0 167 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 IL31Q6EBC2 164 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ZNF669Q96BR6 464 aaPredicted RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ADNPQ9H2P0 1102 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 TFR2Q9UP52 801 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ALDH1A1P00352 501 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 APOA1P02647 267 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 LRRC36Q1X8D7 754 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ANGEL2Q5VTE6 544 aaKnown RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 WDR93Q6P2C0 686 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 IFNEQ86WN2 208 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ZNF555Q8NEP9 628 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 FOPNLQ96NB1 174 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 FAM95CA0A1B0GW59 222 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 PSTPIP1O43586 416 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 HMBSP08397 361 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 PON1P27169 355 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 PNPLA4P41247 253 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 RGS4P49798 205 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 KIZQ2M2Z5 673 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 THAP11Q96EK4 314 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 DLC1Q96QB1 1528 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 FOXN3O00409 490 aaPredicted RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 PTK6Q13882 451 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 GLB1LQ6UWU2 654 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 IPMKQ8NFU5 416 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ZNF512Q96ME7 567 aaPredicted RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 PARK7Q99497 189 aaKnown RBP16.74■□□□□ 0.27
COL2A1-202ENST00000380518 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 BLOC1S6Q9UL45 172 aa16.74■□□□□ 0.27
COL2A1-202ENST00000380518 ADCY3O60266 1144 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 GNL1P36915 607 aaPredicted RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 MTM1Q13496 603 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 PCSK7Q16549 785 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 GFM2Q969S9 779 aaKnown RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 KBTBD4Q9NVX7 518 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 AKT1P31749 480 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 PLA2G4AP47712 749 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 ITPK1Q13572 414 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 SYTL3Q4VX76 610 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 CHORDC1Q9UHD1 332 aaPredicted RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 FAM32AQ9Y421 112 aaKnown RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 RRN3P2A6NIE6 340 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TRIM49D1C9J1S8 452 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 KCNA4P22459 653 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TMEM62Q0P6H9 643 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 EFL1Q7Z2Z2 1120 aaKnown RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 FRMD8P1Q9BZ68 369 aaPredicted RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TMEM39BQ9GZU3 492 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 PKP3Q9Y446 797 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TRIM66O15016 1216 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 NLRP11P59045 1033 aaKnown RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 TBC1D19Q8N5T2 526 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 DNAJC9Q8WXX5 260 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 NSL1Q96IY1 281 aa16.73■□□□□ 0.27
COL2A1-202ENST00000380518 CYP4A22Q5TCH4 519 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 LRRC6Q86X45 466 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CLEC4FQ8N1N0 589 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 GID8Q9NWU2 228 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 GGA3Q9NZ52 723 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CDV3Q9UKY7 258 aaKnown RBP16.72■□□□□ 0.27
COL2A1-202ENST00000380518 ICAM1P05362 532 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 FAM200BP0CF97 657 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
COL2A1-202ENST00000380518 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
COL2A1-202ENST00000380518 NEK2P51955 445 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 GTF2H3Q13889 308 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 MROH9Q5TGP6 573 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 RFWD2Q8NHY2 731 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 TRPC7Q9HCX4 862 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 OGTO15294 1046 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 TAF6P49848 677 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 ST8SIA6P61647 398 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CHI3L2Q15782 390 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 JCADQ9P266 1359 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 C5orf58C9J3I9 102 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 ASMTLO95671 621 aa16.72■□□□□ 0.27
COL2A1-202ENST00000380518 CTCFP49711 727 aaPredicted RBP16.72■□□□□ 0.27
COL2A1-202ENST00000380518 DNAJC3Q13217 504 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms