RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CYP24A1Q07973 514 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 BMT2Q1RMZ1 405 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CCDC14Q49A88 953 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ATP13A4Q4VNC1 1196 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SLFN12LQ6IEE8 588 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF354CQ86Y25 554 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CCDC33Q8N5R6 958 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PIP4K2CQ8TBX8 421 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 GMCL1Q96IK5 515 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 TMEM120AQ9BXJ8 343 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 FIS1Q9Y3D6 152 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MED7O43513 233 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PECAM1P16284 738 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 NCOA4Q13772 614 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 TFDP1Q14186 410 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 FOXR2Q6PJQ5 311 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SV2AQ7L0J3 742 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SLC26A7Q8TE54 656 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 THTPAQ9BU02 230 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SLCO1B3Q9NPD5 702 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PCMTD2Q9NV79 361 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MYH3P11055 1940 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 B2RBV5 119 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CAPN9O14815 690 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CST8O60676 142 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 DDNO94850 711 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PROSCO94903 275 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 VIL1P09327 827 aaKnown RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 BGNP21810 368 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 STRIP1Q5VSL9 837 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 RIBC1Q8N443 379 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SPOCK2Q92563 424 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PAFAH2Q99487 392 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 NGRNQ9NPE2 291 aaKnown RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF302Q9NR11 478 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SENP1Q9P0U3 644 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 UPP2O95045 317 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 HOXD13P35453 343 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 AP2B1P63010 937 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CUL2Q13617 745 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 Q3C1V9 767 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MAP7D1Q3KQU3 841 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 UBAP2Q5T6F2 1119 aaKnown RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 FAXCQ5TGI0 409 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 GPAT2Q6NUI2 795 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 C6orf89Q6UWU4 347 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 MAP7D3Q8IWC1 876 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 RNF146Q9NTX7 359 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 KCNN4O15554 427 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 P4HA1P13674 534 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 ATXN7L3BQ96GX2 97 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SHCBP1LQ9BZQ2 653 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 KCNG1Q9UIX4 513 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 MGRN1O60291 552 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 GRAP2O75791 330 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 KRT3P12035 628 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SSTR1P30872 391 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 VHLP40337 213 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 CDH6P55285 790 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 CCL15Q16663 113 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SLC30A9Q6PML9 568 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 PRPF39Q86UA1 669 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 FITM2Q8N6M3 262 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 KIAA1586Q9HCI6 787 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 R3HDM2Q9Y2K5 976 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 GPC3P51654 580 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 CCNG2Q16589 344 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 STYK1Q6J9G0 422 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 CCNYQ8ND76 341 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 NUP98P52948 1817 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 EXTL3O43909 919 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 LDHAP00338 332 aaKnown RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SLC8A3P57103 927 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 MTMR2Q13614 643 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 SEMA4DQ92854 862 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-202ENST00000379826 ZDHHC15Q96MV8 337 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 ENTPD5O75356 428 aa11.94□□□□□ -0.5
SMAD9-202ENST00000379826 MYL2P10916 166 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms