RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 BFSP1Q12934 665 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 TMEM132DQ14C87 1099 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 SPATA1Q5VX52 437 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 TCEAL6Q6IPX3 200 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 TCEAL3Q969E4 200 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 PYM1Q9BRP8 204 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 IL21Q9HBE4 155 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 HPS4Q9NQG7 708 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 CCL26Q9Y258 94 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 H0YCG3 227 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 RNF40O75150 1001 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 EGFP01133 1207 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 ARSAP15289 507 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 PMLP29590 882 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 HOXA6P31267 233 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 MPLP40238 635 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 RUNX3Q13761 415 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 PTPAQ15257 358 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 METTL23Q86XA0 190 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 CMTM8Q8IZV2 173 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 MYCT1Q8N699 235 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 ZCWPW1Q9H0M4 648 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 TBX20Q9UMR3 447 aa19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 MAGED2Q9UNF1 606 aaPredicted RBP19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.24■□□□□ 0.67
PDLIM4-202ENST00000379018 OTOL1A6NHN0 477 aaPredicted RBP19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 CYB561D2O14569 222 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 FAM13AO94988 1023 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 RAP1GAPP47736 663 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 LIMK1P53667 647 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 KYAT1Q16773 422 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 TMEM196Q5HYL7 178 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 RNF43Q68DV7 783 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 NAIF1Q69YI7 327 aaPredicted RBP19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 CC2D1AQ6P1N0 951 aaPredicted RBP19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 GPBP1Q86WP2 473 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 REEP2Q9BRK0 252 aa19.23■□□□□ 0.67
PDLIM4-202ENST00000379018 DENND4CQ5VZ89 1909 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 DCLK1O15075 740 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 FAM189A1O60320 539 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 ATG13O75143 517 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 SEC24BO95487 1268 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 KRT18P05783 430 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 GPR15P49685 360 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 ACOT2P49753 483 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 PSMD2Q13200 908 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 ARSHQ5FYA8 562 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 HYIQ5T013 277 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 SDHAF4Q5VUM1 108 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 WSCD1Q658N2 575 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 TXNDC8Q6A555 127 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 PSAPL1Q6NUJ1 521 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 LRRTM3Q86VH5 581 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 THEM5Q8N1Q8 247 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 USP13Q92995 863 aaPredicted RBP19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 ZFHX4Q86UP3 3567 aa19.22■□□□□ 0.67
PDLIM4-202ENST00000379018 TISP43B9A030 160 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 HAPLN1P10915 354 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 ATP2C1P98194 919 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 CREB5Q02930 508 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 SLC39A4Q6P5W5 647 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 RPLP0P6Q8NHW5 317 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 CHFRQ96EP1 664 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 FAM83CQ9BQN1 747 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 FBRSL1Q9HCM7 1045 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 TRPC7Q9HCX4 862 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 KCND2Q9NZV8 630 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 HSFX1Q9UBD0 423 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 CPSF3Q9UKF6 684 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 DSEQ9UL01 958 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 INVSQ9Y283 1065 aa19.21■□□□□ 0.67
PDLIM4-202ENST00000379018 OBSL1O75147 1896 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 A0A0B4J269 797 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 PIRO00625 290 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 TRDMT1O14717 391 aaKnown RBP19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 KCNK5O95279 499 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 CYP11A1P05108 521 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 WEE1P30291 646 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 TAF6P49848 677 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 NLRP12P59046 1061 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 PLK5Q496M5 336 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 TMEM119Q4V9L6 283 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 CD302Q8IX05 232 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 RASSF8Q8NHQ8 419 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 RIN3Q8TB24 985 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 PI4K2AQ9BTU6 479 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 EDEM2Q9BV94 578 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 DPP3Q9NY33 737 aa19.2■□□□□ 0.66
PDLIM4-202ENST00000379018 TM4SF5O14894 197 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 GBP1P32455 592 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 NOVA1P51513 510 aaKnown RBP19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 GALK1P51570 392 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 ELF2Q15723 593 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 PLA2G2CQ5R387 149 aa19.19■□□□□ 0.66
PDLIM4-202ENST00000379018 ADALQ6DHV7 355 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms