RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PDGFRAP16234 1089 aa15.14■□□□□ 0.02
PRDM16-203ENST00000378391 KCNJ1P48048 391 aa15.14■□□□□ 0.02
PRDM16-203ENST00000378391 XKR3Q5GH77 459 aa15.14■□□□□ 0.02
PRDM16-203ENST00000378391 IRF2BP1Q8IU81 584 aa15.14■□□□□ 0.02
PRDM16-203ENST00000378391 MARCH10Q8NA82 808 aaPredicted RBP15.14■□□□□ 0.02
PRDM16-203ENST00000378391 PAK5Q9P286 719 aa15.14■□□□□ 0.02
PRDM16-203ENST00000378391 PJA2O43164 708 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ATP9BO43861 1147 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 WASHC5Q12768 1159 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 MAPK7Q13164 816 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 CRYMQ14894 314 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 Q4G0T1 1027 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 LMBRD2Q68DH5 695 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 RBBP8NLQ8NC74 664 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 AGR3Q8TD06 166 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 NSL1Q96IY1 281 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 FRMD8Q9BZ67 464 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 KLHL11Q9NVR0 708 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 NALCNQ8IZF0 1738 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ECE2O60344 883 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 MIIPQ5JXC2 388 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 LVRNQ6Q4G3 990 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 WDR60Q8WVS4 1066 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 MRPL1Q9BYD6 325 aaKnown RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ADAM33Q9BZ11 813 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 GTF3C4Q9UKN8 822 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SMIM22K7EJ46 135 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 FECHP22830 423 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 ITIH4Q14624 930 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 TRIP10Q15642 601 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 TWF2Q6IBS0 349 aaKnown RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 C16orf89Q6UX73 402 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 BRINP3Q76B58 766 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 PRUNE1Q86TP1 453 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 STX12Q86Y82 276 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 RNF135Q8IUD6 432 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 NAF1Q96HR8 494 aaKnown RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 TNIP3Q96KP6 325 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 DACH2Q96NX9 599 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 KLRC4O43908 158 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SPP2Q13103 211 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SGSM1Q2NKQ1 1148 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 SLC13A5Q86YT5 568 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-203ENST00000378391 DDIASQ8IXT1 998 aa15.14■□□□□ 0.01
PRDM16-203ENST00000378391 E5RI56 91 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ANGPT2O15123 496 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 KCNA2P16389 499 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 HSD17B4P51659 736 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 NME3Q13232 169 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 TTLL4Q14679 1199 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 EME1Q96AY2 570 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ZFYVE19Q96K21 471 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ZNF560Q96MR9 790 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 TMEM8AQ9HCN3 771 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 JPH1Q9HDC5 661 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 FBXO9Q9UK97 447 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 AURKCQ9UQB9 309 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 WEE2P0C1S8 567 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ACADSP16219 412 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 VHLP40337 213 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 SERPINB10P48595 397 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 NCOA4Q13772 614 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 NKX1-1Q15270 411 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 TBCCQ15814 346 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 SETD3Q86TU7 594 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 LRRC34Q8IZ02 419 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 LZICQ8WZA0 190 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 GID8Q9NWU2 228 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 COPB2P35606 906 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 LRRC36Q1X8D7 754 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 YTHDF3Q7Z739 585 aaKnown RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 EPAS1Q99814 870 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 MANSC1Q9H8J5 431 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 MARCOQ9UEW3 520 aaPredicted RBP15.13■□□□□ 0.01
PRDM16-203ENST00000378391 SIK3Q9Y2K2 1263 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 FLT1P17948 1338 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ADORA2BP29275 332 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ZNF844Q08AG5 666 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 SCN4BQ8IWT1 228 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 KRT35Q92764 455 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 KLHL25Q9H0H3 589 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 ABCF3Q9NUQ8 709 aa15.13■□□□□ 0.01
PRDM16-203ENST00000378391 C16orf96A6NNT2 1141 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 H0Y626 953 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 EPHB6O15197 1021 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 PSMD3O43242 534 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 FAPQ12884 760 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 MDH1BQ5I0G3 518 aa15.12■□□□□ 0.01
PRDM16-203ENST00000378391 C16orf86Q6ZW13 317 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms