RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 ARMC7Q9H6L4 198 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 MAD1L1Q9Y6D9 718 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 AIM2O14862 343 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 DGKIO75912 1065 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 CAMTA2O94983 1202 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 KRT1P04264 644 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 MXI1P50539 228 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 LPIN1Q14693 890 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 RALGPS1Q5JS13 557 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 AMIGO2Q86SJ2 522 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 WDR75Q8IWA0 830 aaKnown RBP11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 RIC1Q4ADV7 1423 aa11.05□□□□□ -0.64
ARHGEF39-201ENST00000378387 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 K7ENM7 598 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 KDM1AO60341 852 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 NOL3O60936 208 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 OCM2P0CE71 109 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 OCMP0CE72 109 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 AKR1B1P15121 316 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 STAT2P52630 851 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 HDAC4P56524 1084 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 OTUD4Q01804 1114 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 PTK7Q13308 1070 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 PDK1Q15118 436 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 RARS2Q5T160 578 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 C11orf63Q6NUN7 778 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 KLHL35Q6PF15 583 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 CATSPER3Q86XQ3 398 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 PDIK1LQ8N165 341 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 IFT43Q96FT9 208 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 DISP2A7MBM2 1401 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 IQANK1A0A1B0GTG1 560 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 MCF2LO15068 1137 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 RARBP10826 455 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 NRF1Q16656 503 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 ANKRD20A4Q4UJ75 823 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 TBC1D9BQ66K14 1250 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 NET1Q7Z628 596 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 HERC5Q9UII4 1024 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 SOX13Q9UN79 622 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 PCDHA1Q9Y5I3 950 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 MROH7Q68CQ1 1323 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 N4BP2Q86UW6 1770 aaPredicted RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 SPTLC1O15269 473 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 ATG16L1Q676U5 607 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 NXNQ6DKJ4 435 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 SLF2Q8IX21 1173 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 DAGLBQ8NCG7 672 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 NSUN4Q96CB9 384 aaKnown RBP11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 DRC3Q9H069 523 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 TRIM17Q9Y577 477 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
ARHGEF39-201ENST00000378387 SIGLEC16A6NMB1 481 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 CMPK2Q5EBM0 449 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ARHGEF19Q8IW93 802 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ATP11CQ8NB49 1132 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 E2F7Q96AV8 911 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 PCDH18Q9HCL0 1135 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ACTL7BQ9Y614 415 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 P4HA2O15460 535 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 NDUFB5O43674 189 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 TM7SF2O76062 418 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 STT3AP46977 705 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 LMNB2Q03252 620 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 SLC35G1Q2M3R5 365 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 LIN9Q5TKA1 542 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 BSPRYQ5W0U4 402 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 HPS6Q86YV9 775 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 DDHD1Q8NEL9 900 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ZFP28Q8NHY6 868 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 C17orf50Q8WW18 174 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 EME1Q96AY2 570 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 COPS7BQ9H9Q2 264 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 PARVGQ9HBI0 331 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 SIX2Q9NPC8 291 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ARHGAP26Q9UNA1 814 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 NCANO14594 1321 aa11.03□□□□□ -0.64
ARHGEF39-201ENST00000378387 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms