RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 RAB33AQ14088 237 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 TMC5Q6UXY8 1006 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 ZNF461Q8TAF7 563 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 TAF4BQ92750 862 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 HLA-CQ95604 372 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 PABPC5Q96DU9 382 aaKnown RBP12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 BPIFA3Q9BQP9 254 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 TSPY26PQ9H489 355 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 DPEP3Q9H4B8 488 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 HMGXB4Q9UGU5 601 aa12.54□□□□□ -0.4
DEPDC4-202ENST00000378244 MYBPHLA2RUH7 354 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 GABRDO14764 452 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 LHX1P48742 406 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 LMO3Q8TAP4 145 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC22A17Q8WUG5 538 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 KAT5Q92993 513 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 OR6C75A6NL08 312 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 PRRG1O14668 218 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 SOAT2O75908 522 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 ZNF18P17022 549 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 ELF1P32519 619 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 TSPY1Q01534 308 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 DUSP4Q13115 394 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 KCNC3Q14003 757 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 EXOC3L4Q17RC7 722 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 GJB7Q6PEY0 223 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 GPR65Q8IYL9 337 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 TMLHEQ9NVH6 421 aa12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 ABI2Q9NYB9 513 aaPredicted RBP12.53□□□□□ -0.4
DEPDC4-202ENST00000378244 MUC3AQ02505 3323 aa12.52□□□□□ -0.4
DEPDC4-202ENST00000378244 GOLGA6L19H0YKK7 550 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 TACC1O75410 805 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 SEC24AO95486 1093 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 C8AP07357 584 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 ATF2P15336 505 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 NDST1P52848 882 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 GPR17Q13304 367 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 GBP6Q6ZN66 633 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 FAM200AQ8TCP9 573 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 NT5C1BQ96P26 610 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 SYT15Q9BQS2 421 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 ACBD6Q9BR61 282 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 RHOBTB2Q9BYZ6 727 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
DEPDC4-202ENST00000378244 P4HA2O15460 535 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 ABLIM3O94929 683 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 TPM2P07951 284 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 WARSP23381 471 aaKnown RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 PCSK1P29120 753 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 COPB1P53618 953 aaKnown RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CYP27A1Q02318 531 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CUL2Q13617 745 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 TRIM65Q6PJ69 517 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CASP10Q92851 521 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 TWNKQ96RR1 684 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CISHQ9NSE2 258 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 CCDC195A0A1B0GUA6 201 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 NCK2O43639 380 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 SRGAP2BP0DMP2 458 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 PON1P27169 355 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 MDH1BQ5I0G3 518 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 SYCE2Q6PIF2 218 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 SEPT5Q99719 369 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-202ENST00000378244 MTMR11A4FU01 709 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 VNN2O95498 520 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 SERPINC1P01008 464 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 KLK7P49862 253 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 UBXN1Q04323 297 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
DEPDC4-202ENST00000378244 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms