RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ECSITQ9BQ95 431 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 GINM1Q9NU53 330 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 PPM1HQ9ULR3 514 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 SMCHD1A6NHR9 2005 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 SLC18A1P54219 525 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 NFX1Q12986 1120 aaKnown RBP16.69■□□□□ 0.26
CKAP4-201ENST00000378026 MSS51Q4VC12 460 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 HAUS6Q7Z4H7 955 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 TREML1Q86YW5 311 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 NMD3Q96D46 503 aaKnown RBP16.69■□□□□ 0.26
CKAP4-201ENST00000378026 TUBB6Q9BUF5 446 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 TMEM206Q9H813 350 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 RABGEF1Q9UJ41 708 aa16.69■□□□□ 0.26
CKAP4-201ENST00000378026 MTO1Q9Y2Z2 717 aaKnown RBP16.69■□□□□ 0.26
CKAP4-201ENST00000378026 GLRA2P23416 452 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 MFSD7Q6UXD7 560 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 SCUBE1Q8IWY4 988 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ZNF398Q8TD17 642 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 PANX3Q96QZ0 392 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ZNF395Q9H8N7 513 aaPredicted RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ETNK2Q9NVF9 386 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 RAB20Q9NX57 234 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CLUHO75153 1309 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CCDC195A0A1B0GUA6 201 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 PLSCR1O15162 318 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ALOX15BO15296 676 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CIB2O75838 187 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 IL1R1P14778 569 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 HIF1AQ16665 826 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ARHGAP24Q8N264 748 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CENPKQ9BS16 269 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 RANBP17Q9H2T7 1088 aaKnown RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 MEI4A8MW99 385 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 TLR3O15455 904 aaKnown RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 STK10O94804 968 aaKnown RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 MT-ND3P03897 115 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 KRT1P04264 644 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 DLDP09622 509 aaKnown RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 UNGP13051 313 aaPredicted RBP16.68■□□□□ 0.26
CKAP4-201ENST00000378026 CDC16Q13042 620 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 SPDYAQ5MJ70 313 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 ANKRD22Q5VYY1 191 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 PALM2Q8IXS6 379 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 HIPK4Q8NE63 616 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 FBXL13Q8NEE6 735 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 MECRQ9BV79 373 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 STRA6Q9BX79 667 aa16.68■□□□□ 0.26
CKAP4-201ENST00000378026 TXNDC9O14530 226 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 OR6B1O95007 311 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 ALCAMQ13740 583 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 MKL1Q969V6 931 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 NR1H4Q96RI1 486 aaPredicted RBP16.67■□□□□ 0.26
CKAP4-201ENST00000378026 ARHGEF4Q9NR80 690 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 CLIC5Q9NZA1 410 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 NDUFB10O96000 172 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 ALDH18A1P54886 795 aaKnown RBP16.67■□□□□ 0.26
CKAP4-201ENST00000378026 DEUP1Q05D60 604 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 GSTA3Q16772 222 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 CEP128Q6ZU80 1094 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 RASSF3Q86WH2 238 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 BANPQ8N9N5 519 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 FBXO36Q8NEA4 188 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 DCAF4Q8WV16 495 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 PYDC1Q8WXC3 89 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 KAT6AQ92794 2004 aa16.67■□□□□ 0.26
CKAP4-201ENST00000378026 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 DSG3P32926 999 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 AP2B1P63010 937 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 EFHC2Q5JST6 749 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 TRIM74Q86UV6 250 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 TRIM73Q86UV7 250 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 AZIN2Q96A70 460 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 MYPNQ86TC9 1320 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ARHGAP42A6NI28 874 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 A8MXQ7 604 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 CDK7P50613 346 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 RPL7AP62424 266 aaKnown RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 RNASEH2BQ5TBB1 312 aaKnown RBP16.66■□□□□ 0.26
CKAP4-201ENST00000378026 LPCAT4Q643R3 524 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 ALLCQ8N6M5 410 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 PHACTR1Q9C0D0 580 aa16.66■□□□□ 0.26
CKAP4-201ENST00000378026 VPS11Q9H270 941 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms