RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 MYO1DO94832 1006 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SP100P23497 879 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ACTR2P61160 394 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 GRB10Q13322 594 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 P2RX7Q99572 595 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 AP5Z1O43299 807 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CYTH3O43739 400 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 GNL1P36915 607 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SOX10P56693 466 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CCZ1BP86790 482 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 EPC2Q52LR7 807 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 WDR75Q8IWA0 830 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 GOLPH3Q9H4A6 298 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 DISP2A7MBM2 1401 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 DIAPH2O60879 1101 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 TJP3O95049 919 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 BRAFP15056 766 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 VGLL4Q14135 290 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 POLD3Q15054 466 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ICA1LQ8NDH6 482 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 XPO6Q96QU8 1125 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 EPN3Q9H201 632 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 HSPBP1Q9NZL4 362 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 DSEQ9UL01 958 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 THP07101 528 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 OCRLQ01968 901 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 DACT2Q5SW24 774 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ARHGAP10A1A4S6 786 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 VCLP18206 1134 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 GJC2Q5T442 439 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ATP6V0D2Q8N8Y2 350 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 PRMT1Q99873 361 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 FBXO10Q9UK96 956 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 FBXL5Q9UKA1 691 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ITIH6Q6UXX5 1313 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 H3BRB1 525 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ENOSF1Q7L5Y1 443 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 RHOT2Q8IXI1 618 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 DDI1Q8WTU0 396 aa11.31□□□□□ -0.6
HIF3A-205ENST00000377670 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
HIF3A-205ENST00000377670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 DSG3P32926 999 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 NR1I3Q14994 352 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 KIF19Q2TAC6 998 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RAD9BQ6WBX8 426 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF513Q8N8E2 541 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RDM1Q8NG50 284 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 AGXT2Q9BYV1 514 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 SETD4Q9NVD3 440 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PEAK1Q9H792 1746 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HIST1H2AGP0C0S8 130 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 OCM2P0CE71 109 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HIST1H2ADP20671 130 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ARFIP2P53365 341 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PSMC6P62333 389 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HIST1H2AHQ96KK5 128 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 HIST1H2AJQ99878 128 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 H2AFJQ9BTM1 129 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PALMDQ9NP74 551 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 KLHL11Q9NVR0 708 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 TRAF3IP3Q9Y228 551 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
HIF3A-205ENST00000377670 PCDH8O95206 1070 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 VTNP04004 478 aa11.3□□□□□ -0.6
HIF3A-205ENST00000377670 MDH1P40925 334 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms