RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SKILP12757 684 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 LMO2P25791 158 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 MAPK8IP2Q13387 824 aaPredicted RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 MRPL58Q14197 206 aaKnown RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 RAB30Q15771 203 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 ANKS3Q6ZW76 656 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CEP57Q86XR8 500 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 HEXIM2Q96MH2 286 aaKnown RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CHP1Q99653 195 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CHST7Q9NS84 486 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 H7C4K7 107 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 MED7O43513 233 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 STILQ15468 1287 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 VARS2Q5ST30 1063 aaKnown RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 ZNF280DQ6N043 979 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 TMEM139Q8IV31 216 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 GPR65Q8IYL9 337 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CCDC170Q8IYT3 715 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CCDC42Q96M95 316 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 NHEJ1Q9H9Q4 299 aaPredicted RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 PUF60Q9UHX1 559 aaKnown RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 MSRAQ9UJ68 235 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 NOCTQ9UK39 431 aaKnown RBP24.4■■□□□ 1.5
HLA-C-202ENST00000376237 NME7Q9Y5B8 376 aa24.4■■□□□ 1.5
HLA-C-202ENST00000376237 CEP290O15078 2479 aa24.39■■□□□ 1.5
HLA-C-202ENST00000376237 C5orf67F2Z3F1 127 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 CA3P07451 260 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 CD19P15391 556 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 CDR2Q01850 454 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 SGO2Q562F6 1265 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 KIAA1841Q6NSI8 718 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 ACOT1Q86TX2 421 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 NOP9Q86U38 636 aaKnown RBP24.39■■□□□ 1.49
HLA-C-202ENST00000376237 B3GALNT2Q8NCR0 500 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 ZNF606Q8WXB4 792 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 HERC2P3Q9BVR0 1158 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 DEF6Q9H4E7 631 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 LZTS1Q9Y250 596 aa24.39■■□□□ 1.49
HLA-C-202ENST00000376237 THAP12O43422 761 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 MYOGP15173 224 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 PTPN1P18031 435 aaKnown RBP24.38■■□□□ 1.49
HLA-C-202ENST00000376237 CTNNB1P35222 781 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 BMS1Q14692 1282 aaKnown RBP24.38■■□□□ 1.49
HLA-C-202ENST00000376237 HS1BP3Q53T59 392 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 ZNF571Q7Z3V5 609 aaPredicted RBP24.38■■□□□ 1.49
HLA-C-202ENST00000376237 GPIHBP1Q8IV16 184 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 KLHL23Q8NBE8 558 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 PIK3R5Q8WYR1 880 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 DDX1Q92499 740 aaKnown RBP24.38■■□□□ 1.49
HLA-C-202ENST00000376237 TGS1Q96RS0 853 aaKnown RBP24.38■■□□□ 1.49
HLA-C-202ENST00000376237 AGPAT1Q99943 283 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 RTP3Q9BQQ7 232 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 SYT15Q9BQS2 421 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 SYT11Q9BT88 431 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 ACP6Q9NPH0 428 aa24.38■■□□□ 1.49
HLA-C-202ENST00000376237 OR6C75A6NL08 312 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 ARHGAP6O43182 974 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 CYLC1P35663 651 aaPredicted RBP24.37■■□□□ 1.49
HLA-C-202ENST00000376237 EIF4A3P38919 411 aaKnown RBP24.37■■□□□ 1.49
HLA-C-202ENST00000376237 CCZ1BP86790 482 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 CCZ1P86791 482 aaPredicted RBP24.37■■□□□ 1.49
HLA-C-202ENST00000376237 TSPY1Q01534 308 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 DSG1Q02413 1049 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 ORC1Q13415 861 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 MAPRE1Q15691 268 aaKnown RBP24.37■■□□□ 1.49
HLA-C-202ENST00000376237 CNGA2Q16280 664 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 RTP2Q5QGT7 225 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 TAS1R1Q7RTX1 841 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 TRIM44Q96DX7 344 aaPredicted RBP24.37■■□□□ 1.49
HLA-C-202ENST00000376237 VN1R3Q9BXE9 311 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 PBX4Q9BYU1 374 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 SSX2IPQ9Y2D8 614 aa24.37■■□□□ 1.49
HLA-C-202ENST00000376237 PLEKP08567 350 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-202ENST00000376237 TNFAIP3P21580 790 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 DEKP35659 375 aaKnown RBP24.36■■□□□ 1.49
HLA-C-202ENST00000376237 GLUD2P49448 558 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 UBE3AQ05086 875 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 CTXN3Q4LDR2 81 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 INTS6LQ5JSJ4 861 aaKnown RBP24.36■■□□□ 1.49
HLA-C-202ENST00000376237 ARHGAP17Q68EM7 881 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 C11orf84Q9BUA3 381 aaPredicted RBP24.36■■□□□ 1.49
HLA-C-202ENST00000376237 PRO3102Q9H379 93 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 DPEP3Q9H4B8 488 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 PCDHGC3Q9UN70 934 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 BACE2Q9Y5Z0 518 aa24.36■■□□□ 1.49
HLA-C-202ENST00000376237 HCRTO43612 131 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 AKR1B10O60218 316 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 URODP06132 367 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 ACAT1P24752 427 aaKnown RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 BRD2P25440 801 aaKnown RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 ERVK-21P61565 698 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 ASTE1Q2TB18 679 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 TRIM72Q6ZMU5 477 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 VPS52Q8N1B4 723 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 LNX1Q8TBB1 728 aaPredicted RBP24.35■■□□□ 1.49
HLA-C-202ENST00000376237 MYCBPAPQ8TBZ2 947 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 TFAP2BQ92481 460 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 CYFIP2Q96F07 1278 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 C17orf80Q9BSJ5 609 aa24.35■■□□□ 1.49
HLA-C-202ENST00000376237 PDCL3Q9H2J4 239 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms