RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
SDHD-201ENST00000375549 TDRD15B5MCY1 1934 aaKnown RBP13.09□□□□□ -0.31
SDHD-201ENST00000375549 COL4A6Q14031 1691 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 CYP11A1P05108 521 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 MMEP08473 750 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 BRD2P25440 801 aaKnown RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 LHX1P48742 406 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 KIF11P52732 1056 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 CDR2Q01850 454 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 SMYD5Q6GMV2 418 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 FUT10Q6P4F1 479 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 TMEM173Q86WV6 379 aaPredicted RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 GLYCTKQ8IVS8 523 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 COLGALT1Q8NBJ5 622 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 GPR62Q9BZJ7 368 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 DNAI2Q9GZS0 605 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 ADAMTS1Q9UHI8 967 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 STXBP5LQ9Y2K9 1186 aa13.08□□□□□ -0.32
SDHD-201ENST00000375549 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
SDHD-201ENST00000375549 FAM170AA1A519 330 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 H0YGN5 161 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.326e-9■■■■■ 27
SDHD-201ENST00000375549 GABRDO14764 452 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 NDUFA10O95299 355 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 VDRP11473 427 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 CHRNB2P17787 502 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 TYMPP19971 482 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 RABGGTBP53611 331 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
SDHD-201ENST00000375549 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
SDHD-201ENST00000375549 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
SDHD-201ENST00000375549 OVOS1Q6IE37 1185 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 TOGARAM2Q6ZUX3 1019 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 THEM5Q8N1Q8 247 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 LNX1Q8TBB1 728 aaPredicted RBP13.07□□□□□ -0.32
SDHD-201ENST00000375549 ZNF606Q8WXB4 792 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 TFAP2BQ92481 460 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
SDHD-201ENST00000375549 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 DESI2Q9BSY9 194 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 SYT11Q9BT88 431 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 AAASQ9NRG9 546 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 SCN1AP35498 2009 aa13.07□□□□□ -0.32
SDHD-201ENST00000375549 A0A087X0T9 212 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 LCHNA4D1U4 455 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 EIF3CLB5ME19 914 aaKnown RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 SYN3O14994 580 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 MED7O43513 233 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 ATP2C2O75185 946 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 FAM228BP0C875 321 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 PSMC1P62191 440 aaKnown RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 FMO1Q01740 532 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 SPA17Q15506 151 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 SGO2Q562F6 1265 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 TAS1R1Q7RTX1 841 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 CRYBG2Q8N1P7 616 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 C12orf29Q8N999 325 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 SPATA18Q8TC71 538 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 TMEM169Q96HH4 297 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 EIF3CQ99613 913 aaKnown RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 SYT15Q9BQS2 421 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 FAM49BQ9NUQ9 324 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 KIAA1257Q9ULG3 409 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 ZKSCAN5Q9Y2L8 839 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
SDHD-201ENST00000375549 FNDC1Q4ZHG4 1894 aaPredicted RBP13.06□□□□□ -0.32
SDHD-201ENST00000375549 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 TMCO5BA8MYB1 307 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 CFHP08603 1231 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
SDHD-201ENST00000375549 ANXA13P27216 316 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 PCSK1P29120 753 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
SDHD-201ENST00000375549 CCDC122Q5T0U0 273 aa13.05□□□□□ -0.32
SDHD-201ENST00000375549 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
SDHD-201ENST00000375549 B3GALNT2Q8NCR0 500 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms