RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CDC42EP4Q9H3Q1 356 aaKnown RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 PPME1Q9Y570 386 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 RECQLP46063 649 aaPredicted RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 KDSRQ06136 332 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 ITIH4Q14624 930 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 TTC39BQ5VTQ0 682 aaPredicted RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 NOTUMQ6P988 496 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 MPZL3Q6UWV2 235 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 FAM71DQ8N9W8 422 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 SLC20A1Q8WUM9 679 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 SPON2Q9BUD6 331 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 VCAM1P19320 739 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 CTCFP49711 727 aaPredicted RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 IL1RL1Q01638 556 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 RARS2Q5T160 578 aaKnown RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 ARHGAP18Q8N392 663 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 MSL3Q8N5Y2 521 aaKnown RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 CATSPER1Q8NEC5 780 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 CLMNQ96JQ2 1002 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 ITGB3P05106 788 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 PHEXP78562 749 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 LAMB3Q13751 1172 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 ZNF484Q5JVG2 852 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 LRRN4CLQ8ND94 238 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 PPHLN1Q8NEY8 458 aaKnown RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 FAM8A1Q9UBU6 413 aa20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.42■□□□□ 0.86
TGFBR1-201ENST00000374990 TGFB3P10600 412 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 GPRC5AQ8NFJ5 357 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 EML4Q9HC35 981 aaKnown RBP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 EEF2KO00418 725 aaKnown RBP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 MAP2K7O14733 419 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 HNRNPH3P31942 346 aaKnown RBP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 CLEC16AQ2KHT3 1053 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 LRRC55Q6ZSA7 311 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 WDR49Q8IV35 697 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 E2F7Q96AV8 911 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 CYP3A43Q9HB55 503 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 DNAJC3Q13217 504 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 PDK2Q15119 407 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 DCAF4L1Q3SXM0 396 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 AENQ8WTP8 325 aaKnown RBP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 MANSC1Q9H8J5 431 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 RNF103-CHMP3A0A140T963 221 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 TTC36A6NLP5 189 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 PDE1CQ14123 709 aaPredicted RBP20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 COBLL1Q53SF7 1204 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 ULK4Q96C45 1275 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 TSPAN17Q96FV3 270 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 KCNMB3Q9NPA1 279 aa20.41■□□□□ 0.86
TGFBR1-201ENST00000374990 TNPO2O14787 897 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CAND2O75155 1236 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PDHA1P08559 390 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 ICA1LQ8NDH6 482 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PCMTD2Q9NV79 361 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 ABT1Q9ULW3 272 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 SLC12A3P55017 1021 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PRAMEF18Q5VWM3 479 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 NT5DC3Q86UY8 548 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 SLC47A2Q86VL8 602 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 AFG1LQ8WV93 481 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PARK7Q99497 189 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 MTMR12Q9C0I1 747 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 SLC24A2Q9UI40 661 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 NLRP11P59045 1033 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CYP4A22Q5TCH4 519 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 UBA3Q8TBC4 463 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 MTBPQ96DY7 904 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 SLC40A1Q9NP59 571 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 AVENQ9NQS1 362 aaPredicted RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 TAF6P49848 677 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 FUT2Q10981 343 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CUL3Q13618 768 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 EPS8L3Q8TE67 593 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CMTM5Q96DZ9 223 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 KLF6Q99612 283 aaPredicted RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CNPY3Q9BT09 278 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CDY2AQ9Y6F7 541 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 CDY1Q9Y6F8 540 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 TRIM49D1C9J1S8 452 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 DACT2Q5SW24 774 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 DNERQ8NFT8 737 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PARD3BQ8TEW8 1205 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 PDCD6IPQ8WUM4 868 aaKnown RBP20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 OLFM3Q96PB7 478 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 OSBPL1AQ9BXW6 950 aa20.4■□□□□ 0.86
TGFBR1-201ENST00000374990 GNL1P36915 607 aaPredicted RBP20.39■□□□□ 0.86
TGFBR1-201ENST00000374990 CALML6Q8TD86 181 aa20.39■□□□□ 0.86
TGFBR1-201ENST00000374990 PFDN1O60925 122 aa20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 ENO1P06733 434 aaKnown RBP20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 FDFT1P37268 417 aa20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 DGKDQ16760 1214 aa20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 DCAF6Q58WW2 860 aa20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 CAPRIN2Q6IMN6 1127 aaKnown RBP20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 FAM167BQ9BTA0 163 aa20.39■□□□□ 0.85
TGFBR1-201ENST00000374990 DFFAO00273 331 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms