RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 HECW2Q9P2P5 1572 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 ABCB1P08183 1280 aaPredicted RBP8.71□□□□□ -1.01
HSPG2-203ENST00000374695 ACCSLQ4AC99 568 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 GOLPH3Q9H4A6 298 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 CD274Q9NZQ7 290 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 VAV3Q9UKW4 847 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 LRCH1Q9Y2L9 728 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 SSU72P8A0A1W2PR75 194 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 RPS6P62753 249 aaKnown RBP8.71□□□□□ -1.01
HSPG2-203ENST00000374695 AGAP9Q5VTM2 703 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 ILKAPQ9H0C8 392 aaPredicted RBP8.71□□□□□ -1.01
HSPG2-203ENST00000374695 HDHD2Q9H0R4 259 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 LSM7Q9UK45 103 aaKnown RBP8.71□□□□□ -1.01
HSPG2-203ENST00000374695 POLIQ9UNA4 740 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 ZFYVE16Q7Z3T8 1539 aa8.71□□□□□ -1.01
HSPG2-203ENST00000374695 TTC3P53804 2025 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 TBC1D12O60347 775 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CBFA2T3O75081 653 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CNOT3O75175 753 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FYNP06241 537 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FDX1P10109 184 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ATP6V1B1P15313 513 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 H2AFXP16104 143 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 TRMT5Q32P41 509 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 UNC45BQ8IWX7 931 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 AGR3Q8TD06 166 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CYP2D7A0A087X1C5 515 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FAM25AB3EWG3 89 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FAM25CB3EWG5 89 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FAM25GB3EWG6 89 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 SLCO1B7G3V0H7 640 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 RGS20O76081 388 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ITGAXP20702 1163 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CCDC153Q494R4 210 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ARHGAP27Q6ZUM4 889 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 PID1Q7Z2X4 250 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 MAGEB18Q96M61 343 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 F8W810 466 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 DYRK3O43781 588 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 VIL1P09327 827 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CALB2P22676 271 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ACADSBP45954 432 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FOXP4Q8IVH2 680 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 GALNT4Q8N4A0 578 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 RMDN3Q96TC7 470 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 MRPL39Q9NYK5 338 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 IL18RAPO95256 599 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 GDF11O95390 407 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 RASGRP2Q7LDG7 609 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 TTC30AQ86WT1 665 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 CENPLQ8N0S6 344 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 COA7Q96BR5 231 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ATXN7L3BQ96GX2 97 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 FAM213AQ9BRX8 229 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 HEATR9A2RTY3 570 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ATP1A3P13637 1013 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 TPP2P29144 1249 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 DNAJC10Q8IXB1 793 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 WARSP23381 471 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 PIK3R1P27986 724 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 NARS2Q96I59 477 aaKnown RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF341Q9BYN7 854 aa8.71□□□□□ -1.02
HSPG2-203ENST00000374695 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
HSPG2-203ENST00000374695 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 A1BGP04217 495 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 DNAJC7Q99615 494 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 FAM49AQ9H0Q0 323 aaPredicted RBP8.7□□□□□ -1.02
HSPG2-203ENST00000374695 GREM2Q9H772 168 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 DCLRE1BQ9H816 532 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 PCSK1NQ9UHG2 260 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 PSTPIP1O43586 416 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF862O60290 1169 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 CNTFP26441 200 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 FBXW10Q5XX13 1052 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 CDC73Q6P1J9 531 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 MAN1C1Q9NR34 630 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 APEX2Q9UBZ4 518 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 AMACRQ9UHK6 382 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 KLHL20Q9Y2M5 609 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 FSBPO95073 299 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 EDC3Q96F86 508 aaKnown RBP8.7□□□□□ -1.02
HSPG2-203ENST00000374695 NUDT2P50583 147 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 USP11P51784 963 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 FAM83EQ2M2I3 478 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 ADGRG1Q9Y653 693 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 TKTP29401 623 aaKnown RBP8.7□□□□□ -1.02
HSPG2-203ENST00000374695 EIF2B2P49770 351 aaKnown RBP8.7□□□□□ -1.02
HSPG2-203ENST00000374695 CENPCQ03188 943 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 RCN1Q15293 331 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 TBC1D10BQ4KMP7 808 aaPredicted RBP8.7□□□□□ -1.02
HSPG2-203ENST00000374695 ZFP1Q6P2D0 407 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 ZNF333Q96JL9 665 aa8.7□□□□□ -1.02
HSPG2-203ENST00000374695 MARCOQ9UEW3 520 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms