RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 EXD1Q8NHP7 514 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 MAIP1Q8WWC4 291 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 NIFKQ9BYG3 293 aaKnown RBP18.01■□□□□ 0.47
RXRB-201ENST00000374680 CSADQ9Y600 493 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 C5orf60A6NFR6 353 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 PSTPIP1O43586 416 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 MAFO75444 373 aaPredicted RBP18.01■□□□□ 0.47
RXRB-201ENST00000374680 IQCF3P0C7M6 154 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 KRT15P19012 456 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 E2F5Q15329 346 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 TARBP2Q15633 366 aaKnown RBP18.01■□□□□ 0.47
RXRB-201ENST00000374680 CDO1Q16878 200 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 SPDYCQ5MJ68 293 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 EFCAB12Q6NXP0 572 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 SPOCD1Q6ZMY3 1216 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 ZBTB8OSQ8IWT0 167 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 KIAA0319LQ8IZA0 1049 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 CNPY4Q8N129 248 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
RXRB-201ENST00000374680 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
RXRB-201ENST00000374680 STMN4Q9H169 189 aaPredicted RBP18.01■□□□□ 0.47
RXRB-201ENST00000374680 WDR81Q562E7 1941 aa18■□□□□ 0.47
RXRB-201ENST00000374680 WDR91A4D1P6 747 aa18■□□□□ 0.47
RXRB-201ENST00000374680 LIASO43766 372 aa18■□□□□ 0.47
RXRB-201ENST00000374680 GDF10P55107 478 aa18■□□□□ 0.47
RXRB-201ENST00000374680 PSMC1P62191 440 aaKnown RBP18■□□□□ 0.47
RXRB-201ENST00000374680 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
RXRB-201ENST00000374680 MKRN3Q13064 507 aaKnown RBP18■□□□□ 0.47
RXRB-201ENST00000374680 PTPN20Q4JDL3 420 aa18■□□□□ 0.47
RXRB-201ENST00000374680 SH3PXD2AQ5TCZ1 1133 aa18■□□□□ 0.47
RXRB-201ENST00000374680 KIF2BQ8N4N8 673 aa18■□□□□ 0.47
RXRB-201ENST00000374680 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
RXRB-201ENST00000374680 CHST13Q8NET6 341 aa18■□□□□ 0.47
RXRB-201ENST00000374680 TWNKQ96RR1 684 aa18■□□□□ 0.47
RXRB-201ENST00000374680 GOLGA8RI6L899 631 aa18■□□□□ 0.47
RXRB-201ENST00000374680 OGTO15294 1046 aa18■□□□□ 0.47
RXRB-201ENST00000374680 IL1R2P27930 398 aa18■□□□□ 0.47
RXRB-201ENST00000374680 NEDD9Q14511 834 aa18■□□□□ 0.47
RXRB-201ENST00000374680 DNERQ8NFT8 737 aa18■□□□□ 0.47
RXRB-201ENST00000374680 CALN1Q9BXU9 219 aa18■□□□□ 0.47
RXRB-201ENST00000374680 RNPEPQ9H4A4 650 aa18■□□□□ 0.47
RXRB-201ENST00000374680 SMYD3Q9H7B4 428 aa18■□□□□ 0.47
RXRB-201ENST00000374680 CST8O60676 142 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 NFICP08651 508 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 KRT3P12035 628 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 PDIA2Q13087 525 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 ATF7IP2Q5U623 682 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TRIM72Q6ZMU5 477 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 YTHDF3Q7Z739 585 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 SERPINB12Q96P63 405 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TJP3O95049 919 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 EFTUD2Q15029 972 aaKnown RBP eCLIP17.99■□□□□ 0.475e-7■■■■□ 23.5
RXRB-201ENST00000374680 METTL7BQ6UX53 244 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 CENPTQ96BT3 561 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TGS1Q96RS0 853 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 ASCC2Q9H1I8 757 aaPredicted RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 METTL5Q9NRN9 209 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TRIM33Q9UPN9 1127 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TNS1Q9HBL0 1735 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 STAM2O75886 525 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 UBOX5O94941 541 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 VTNP04004 478 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 ITGB3P05106 788 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 KLRC2P26717 231 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 PKN2Q16513 984 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 SGSM1Q2NKQ1 1148 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 ZC3H18Q86VM9 953 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 RCOR2Q8IZ40 523 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 ACTL9Q8TC94 416 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 TBC1D31Q96DN5 1066 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 CPXM1Q96SM3 734 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 ROPN1BQ9BZX4 212 aaPredicted RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 ROPN1Q9HAT0 212 aaPredicted RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 ALG13Q9NP73 1137 aaKnown RBP17.99■□□□□ 0.47
RXRB-201ENST00000374680 BAIAP2L1Q9UHR4 511 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
RXRB-201ENST00000374680 HOXC6P09630 235 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 TXNP10599 105 aaKnown RBP17.98■□□□□ 0.47
RXRB-201ENST00000374680 SSTR1P30872 391 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 ICAM3P32942 547 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 ANKRD22Q5VYY1 191 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 WDR49Q8IV35 697 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 CEP83Q9Y592 693 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 GPR25O00155 361 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 TNNC2P02585 160 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 RFC5P40937 340 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 OTUD4Q01804 1114 aaKnown RBP17.98■□□□□ 0.47
RXRB-201ENST00000374680 MMRN1Q13201 1228 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 TRPM8Q7Z2W7 1104 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 PIGWQ7Z7B1 504 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 FUKQ8N0W3 1084 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 SLCO2A1Q92959 643 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 GPR20Q99678 358 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 CCDC77Q9BR77 488 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 SDCBP2Q9H190 292 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 NKIRAS1Q9NYS0 192 aa17.98■□□□□ 0.47
RXRB-201ENST00000374680 IGKV6D-21A0A0A0MT36 114 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms