RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 WEE2P0C1S8 567 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 ATF2P15336 505 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 SLC9A1P19634 815 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 LMO2P25791 158 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 TSPY1Q01534 308 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 GCNT1Q02742 428 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 LRMPQ12912 555 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 CUL2Q13617 745 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 FKBP15Q5T1M5 1219 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 DPY19L2P1Q6NXN4 242 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 FAM171BQ6P995 826 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 TRIM65Q6PJ69 517 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 LRRTM3Q86VH5 581 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 GLYCTKQ8IVS8 523 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 CRYBG2Q8N1P7 616 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 CASP10Q92851 521 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 JAKMIP2Q96AA8 810 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 PABPC5Q96DU9 382 aaKnown RBP12.14□□□□□ -0.47
HSPG2-202ENST00000374676 PKMYT1Q99640 499 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 FBXW11Q9UKB1 542 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 BARX2Q9UMQ3 279 aaPredicted RBP12.14□□□□□ -0.47
HSPG2-202ENST00000374676 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
HSPG2-202ENST00000374676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 A8MXQ7 604 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 CILPO75339 1184 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 GLP2RO95838 553 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 CPB1P15086 417 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 EPCAMP16422 314 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 ACAT1P24752 427 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 RAP1GAPP47736 663 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 ARPP19P56211 112 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 CCDC85BQ15834 202 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 NFE2Q16621 373 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 FILIP1LQ4L180 1135 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 INTS6LQ5JSJ4 861 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 PHLDB3Q6NSJ2 640 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 UBR7Q8N806 425 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 KREMEN2Q8NCW0 462 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 VN1R2Q8NFZ6 395 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 MAFAQ8NHW3 353 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 C2orf15Q8WU43 125 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 ERGIC2Q96RQ1 377 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 TMEM209Q96SK2 561 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 SYT15Q9BQS2 421 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 DNAI2Q9GZS0 605 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 SIX2Q9NPC8 291 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
HSPG2-202ENST00000374676 CISHQ9NSE2 258 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 DZANK1Q9NVP4 752 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 HSFX1Q9UBD0 423 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 APEX2Q9UBZ4 518 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 PTPRDP23468 1912 aa12.13□□□□□ -0.47
HSPG2-202ENST00000374676 A0A1B0GTH6 734 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 MYBPHLA2RUH7 354 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 LINC01565O15544 149 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 HCRTO43612 131 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 PAPLNO95428 1278 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 VNN2O95498 520 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 HOXB8P17481 243 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-202ENST00000374676 PTPN1P18031 435 aaKnown RBP12.12□□□□□ -0.47
HSPG2-202ENST00000374676 ACO1P21399 889 aaKnown RBP12.12□□□□□ -0.47
HSPG2-202ENST00000374676 LTBRP36941 435 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 NDST1P52848 882 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 FANCCQ00597 558 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 UBXN1Q04323 297 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 NR1I3Q14994 352 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 SLC39A12Q504Y0 691 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 LLGL2Q6P1M3 1020 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 RNF19BQ6ZMZ0 732 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 RRAGAQ7L523 313 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 PPM1KQ8N3J5 372 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 SPPL2BQ8TCT7 592 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 PPM1EQ8WY54 764 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 TNIP3Q96KP6 325 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-202ENST00000374676 ARID3AQ99856 593 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 NT5C1AQ9BXI3 368 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-202ENST00000374676 CRTAC1Q9NQ79 661 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 CLDND1Q9NY35 253 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 COG5Q9UP83 839 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
HSPG2-202ENST00000374676 MYH10P35580 1976 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms