RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 LMAN2LQ9H0V9 348 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 FAM124BQ9H5Z6 455 aaPredicted RBP18.7■□□□□ 0.58
PFDN6-201ENST00000374606 CISHQ9NSE2 258 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 PCDHB4Q9Y5E5 795 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 TSC2P49815 1807 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 ATG2AQ2TAZ0 1938 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 FOXN3O00409 490 aaPredicted RBP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 CYB561D2O14569 222 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 HUS1O60921 280 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 RB1P06400 928 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 ODC1P11926 461 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 LTBRP36941 435 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SLC11A1P49279 550 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 AARSP49588 968 aaKnown RBP eCLIP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SMAD2Q15796 467 aaKnown RBP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SPOUT1Q5T280 376 aaKnown RBP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SMYD5Q6GMV2 418 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 LRRC8AQ8IWT6 810 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 FIBCD1Q8N539 461 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 TOP6BLQ8N6T0 577 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 CCDC112Q8NEF3 446 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SENP8Q96LD8 212 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 C11orf84Q9BUA3 381 aaPredicted RBP18.69■□□□□ 0.58
PFDN6-201ENST00000374606 COLEC11Q9BWP8 271 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 SDCBP2Q9H190 292 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 AIPL1Q9NZN9 384 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 FAN1Q9Y2M0 1017 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 RWDD3Q9Y3V2 267 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 KIAA1671Q9BY89 1806 aa18.69■□□□□ 0.58
PFDN6-201ENST00000374606 ARHGEF37A1IGU5 675 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 NRP1O14786 923 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 ALDH2P05091 517 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 ITGB1P05556 798 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 GALTP07902 379 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 LAG3P18627 525 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 BRCC3P46736 316 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 CDH8P55286 799 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 BCAR1P56945 870 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 MEA1Q16626 185 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 SOWAHAQ2M3V2 549 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 CTC1Q2NKJ3 1217 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 TDRD12Q587J7 1177 aaKnown RBP18.68■□□□□ 0.58
PFDN6-201ENST00000374606 DPH6Q7L8W6 267 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 FAM71AQ8IYT1 594 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 ADGRF2Q8IZF7 708 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 RBBP8NLQ8NC74 664 aaPredicted RBP18.68■□□□□ 0.58
PFDN6-201ENST00000374606 BAG1Q99933 345 aaPredicted RBP18.68■□□□□ 0.58
PFDN6-201ENST00000374606 CWH43Q9H720 699 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 MUTYHQ9UIF7 546 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 WDFY4Q6ZS81 3184 aa18.68■□□□□ 0.58
PFDN6-201ENST00000374606 TECTAO75443 2155 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 CARNS1A5YM72 827 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 C5orf67F2Z3F1 127 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 F8W810 466 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 MBTPS2O43462 519 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 TRAPPC3O43617 180 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 TACC1O75410 805 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 TADA2AO75478 443 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 SERPING1P05155 500 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 FECHP22830 423 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 IGFBP6P24592 240 aaPredicted RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 ALDH7A1P49419 539 aaKnown RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 KLHL30Q0D2K2 578 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 INCA1Q0VD86 236 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 SMAD4Q13485 552 aaKnown RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 CLUL1Q15846 466 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 CD300LGQ6UXG3 332 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 TRIM44Q96DX7 344 aaPredicted RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 SUSD3Q96L08 255 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 MRPL45Q9BRJ2 306 aaKnown RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 MARCH5Q9NX47 278 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 BARX2Q9UMQ3 279 aaPredicted RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 CNTN6Q9UQ52 1028 aa18.67■□□□□ 0.58
PFDN6-201ENST00000374606 MRPL42Q9Y6G3 142 aaKnown RBP18.67■□□□□ 0.58
PFDN6-201ENST00000374606 I3L4J1 428 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 CYP26A1O43174 497 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 CILPO75339 1184 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 BMPR1AP36894 532 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 PBX3P40426 434 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 PDE6CP51160 858 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 CDK17Q00537 523 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 HYAL1Q12794 435 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 WDR59Q6PJI9 974 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 LIMS2Q7Z4I7 341 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 RNF135Q8IUD6 432 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 TMEM86AQ8N2M4 240 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 OR6B3Q8NGW1 331 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 KBTBD7Q8WVZ9 684 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 ZNF558Q96NG5 402 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 DNAI2Q9GZS0 605 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 DSEQ9UL01 958 aa18.66■□□□□ 0.58
PFDN6-201ENST00000374606 BZW2Q9Y6E2 419 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms