RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 NIF3L1Q9GZT8 377 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.58
CXCL12-203ENST00000374429 MAD1L1Q9Y6D9 718 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 MSCO60682 206 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 RNF8O76064 485 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 LYPLA2O95372 231 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 PEX19P40855 299 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 NDST1P52848 882 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 CDH6P55285 790 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 OGDHQ02218 1023 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 KRT81Q14533 505 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 QPCTQ16769 361 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 IER5Q5VY09 327 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 RHOT1Q8IXI2 618 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 DNERQ8NFT8 737 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 TMC2Q8TDI7 906 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 CPXM1Q96SM3 734 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 CGRRF1Q99675 332 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 SLITRK6Q9H5Y7 841 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 VIPAS39Q9H9C1 493 aa11.4□□□□□ -0.58
CXCL12-203ENST00000374429 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
CXCL12-203ENST00000374429 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
CXCL12-203ENST00000374429 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.59
CXCL12-203ENST00000374429 NRXN2Q9P2S2 1712 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 A8MXQ7 604 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 EIF3HO15372 352 aaKnown RBP eCLIP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PDGFRAP16234 1089 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 CHRNA3P32297 505 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ARL2P36404 184 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NOMO3P69849 1222 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NME3Q13232 169 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 DDX1Q92499 740 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ARHGEF2Q92974 986 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 RBM15Q96T37 977 aaKnown RBP eCLIP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 SENP7Q9BQF6 1050 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 EIF2AQ9BY44 585 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ZNF112Q9UJU3 913 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 SYNPO2Q9UMS6 1093 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 KLHL33A6NCF5 533 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 AVILO75366 819 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PGK1P00558 417 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 GH1P01241 217 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 IGFBP6P24592 240 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ECHS1P30084 290 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 MDH1P40925 334 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PEX5P50542 639 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 CORO7P57737 925 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 CACNB2Q08289 660 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 HOOK3Q86VS8 718 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 TRIM56Q9BRZ2 755 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 UBXN6Q9BZV1 441 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NXF3Q9H4D5 531 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 GINM1Q9NU53 330 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 H0YCG3 227 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 MAFO75444 373 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 GZMAP12544 262 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 GCKP35557 465 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PDIA2Q13087 525 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 SGSM1Q2NKQ1 1148 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 EML3Q32P44 896 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PTPN20Q4JDL3 420 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ZNF618Q5T7W0 954 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 DARS2Q6PI48 645 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 SLFN11Q7Z7L1 901 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 PNMA8AQ86V59 439 aaPredicted RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NLRP14Q86W24 1093 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 C1orf127Q8N9H9 656 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 ACAP3Q96P50 834 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NTPCRQ9BSD7 190 aaKnown RBP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 MED10Q9BTT4 135 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
CXCL12-203ENST00000374429 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
CXCL12-203ENST00000374429 EVPLQ92817 2033 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 SIPA1L1O43166 1804 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CCDC130P13994 396 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 MUTP22033 750 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 PPP2R2AP63151 447 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 TMEM132DQ14C87 1099 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 STKLD1Q8NE28 680 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CFAP36Q96G28 342 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 ATXN7L3BQ96GX2 97 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 UVRAGQ9P2Y5 699 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 EXOC1LA0A1B0GW35 172 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 EIF4E1BA6NMX2 242 aaKnown RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 E5RJQ4 531 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CYP2C9P11712 490 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 SAT1P21673 171 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 YWHAGP61981 247 aaKnown RBP eCLIP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms